Perca flavescens (yellow perch): 114571036
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Entry
114571036 CDS
T07494
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114571036 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114571036 (exosc2)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114571036 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
114571036 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
114571036
NCBI-ProteinID:
XP_028457600
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All DBs
Position
16:18361703..18367429
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AA seq
293 aa
AA seq
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MAADMRLPTIQKPVSLSVSALGRKDLVVPGDVITSDTGFMRGHGTYVDEDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASVILGNNGFVWLYPTPEQQDEEAGGFYTSLEPVGLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSVQHQVKDILKPEVMEEIVMLTQQKLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacatgagattaccaactattcaaaaaccagtgtcgctatcagtttctgct
ttgggccgaaaagatttggtcgtccccggcgatgttatcacttcagacaccggcttcatg
aggggtcatggtacctatgtggatgaagacaagctgacggcttcagttgctggagaggtg
cagagagtagacaagttgatctgtgtcagaccacttaagaccaggttcaacggtgaggtt
ggagatgtggtggttggcagaatcacagaggttcaacagaaacggtggaaagtggagacc
aactcacggctggactctgtcctcttgttgtcctctgtcaatctgcctgggggagagctg
aggagacgatcagcagaagatgagctcaccatgagagaataccttcaggagggcgatctc
atcagtgccgaggtgcagtctgtgttctccgatggagcactttccctgcacacccgtagt
ttaaagtatggaaaattggggcaaggagtgctggtgcagctttctccttctctgatcaag
aggcagaaaacacatttccacaacctgccatgtggtgcatcagtcatcctcgggaataac
ggctttgtgtggttatatcccacacctgaacaacaagatgaagaggctgggggcttctat
accagcctggagcctgttggtctgtcagatcgagaagtgatttcacggctgagaaactgc
ctactggctttggctgcacataaggtccttttgtatgacaccagtgttctctattgctat
gaatcctcagttcaacaccaggtcaaggacatcttgaaaccagaagtgatggaggagatt
gtaatgttgacgcaacagaagctgttagaacaggaaggttaa
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integrated database retrieval system
