Perca flavescens (yellow perch): 114571164
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Entry
114571164 CDS
T07494
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114571164 (taf1c)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
114571164 (taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
114571164
NCBI-ProteinID:
XP_028457801
LinkDB
All DBs
Position
16:complement(5506940..5525822)
Genome browser
AA seq
1089 aa
AA seq
DB search
MDYQFPQQLFPSFYNCAPPDSVLKHCAGNWGCYDRVRPQGTSGPLSSWTFTSRHQVRGET
WRHTEPIPIPLLSPKKSFLWPSTPPDPLDFTKHMENFFMDHYLDAFGCMSEILSENFNFK
QGQRERYRRDSVHMWKVKNFLDMLKYKICAQSYSSRSLDTYSALLSDVVPSIPPELLGSL
LYEELTEQRDRMLFSEGATGGALAFVPYSQSGSDSQRGCLLYPGNQGLDCLNFHRVELQH
HKGSSSCVEVSSSDPFSFQLKGPVRQISSASLLNDCCVAVRSDHLCGVWRFSERNEPRLL
QVVNTREVATCINVSPHVLGEVLVASESGAANLWTVGKGMQKIREEDSNLYFNAKSSWRW
CEFSAHPRVMLYADRTGVELTDIRVNPVSNHTLFRISNTPECRSGERLILSRYLGDVHPF
QHLITTQFSAYIMDERFPCMPMLKWDHMMQSPPMFCHAVCGAKTTKVLLGSHSSQEITML
QYSGGRAEACSTHGPPRALLRPRDSLKHLPVQIPHRLDIATSRLSSPAAGLTCIQKRGGR
EAGGEECICILQLTEAGDIFYQILEPEQPDTCRPPAADDDLLPQPTLKEVTTSGRKPAKQ
LQPPSQMVVSDTSSDEGVIGPTQGPTVQRFVAETPEREQQVLNSYNSSEDSDSGGKGQNL
KQFGLQVIVNDDPELDQVCGLEVGVKDGKVGKDTADNTEEPSSLGHIGPSEWQTPVKLSD
GALITWKHWLQKLMRKSRDKKPRPRCLQHLTVKTGGLLHLSEDERDEAQRYSTKAKPVQS
LRRDLRACMSKRSLLVHSAVSASLGAPDVVMVPDPVDTEVWRDQISQRLTLSWQGEEAWR
AWWEDQLGLNREEKVEALKRKRRREKEAKRATGRRLQLSGSFTSSVSYQSELGDFSDSTG
WSSAASQGAWSDTESKMSQLEGSLECRTPRASTPSTMQTDTPAYTPTTTPQSVKDKQGDQ
QTPSRSRTLALSQTPKPDSTLANQRSNKRPAEDYLSSLFAPQDEPSQHDGYFLEQGSTVH
HPPPPMALSSSQLRSSQPVPQRSLRMDLSQDTAVWSGFSQSQSLSQSSQGRMGLSQASQP
KRKKSRMGF
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggattaccagttcccacagcagctttttccttcgttttacaactgcgcaccgccggac
tcggtcctgaaacactgcgctggaaactggggctgctacgaccgagtcagacctcagggc
acctccggtcctctctccagctggacattcacatccaggcatcaggtcagaggggagacg
tggcgtcacactgagccaataccaattcccctcctgtctcctaaaaagtctttcctttgg
ccttctacgcccccagatccactggacttcacaaaacatatggagaacttcttcatggac
cactacctggatgccttcgggtgcatgagtgaaattctgagcgaaaatttcaactttaaa
caaggacagagagagagatatcgcagggattcagtccacatgtggaaggtgaaaaacttc
cttgacatgctgaagtataaaatatgcgcgcagtcctattcctccagatcgctggacacg
tacagcgccctgctgtcggacgtggtgccttccatccctcctgagctgctgggttctctg
ctgtacgaggagctgacggagcagagagaccgcatgctgttctctgaaggagccaccggg
ggcgctctggcttttgtcccctattcacagagcggcagcgactctcagcgtggctgtctc
ctctaccctggaaaccagggactggactgcctcaacttccacagagtggagctgcagcac
cacaaaggaagttcttcctgtgtggaggtcagcagcagtgacccgttcagcttccagctg
aaaggccctgtcagacagatcagctccgcctccctgttaaatgactgttgtgttgcggtg
cggtcggatcacctgtgtggagtttggaggttcagcgaaagaaatgaacctcgtctgctg
caagttgtcaacaccagagaggtcgcaacctgcatcaacgtcagtcctcatgttttaggt
gaagttctagtggcaagtgaaagtggagcagcaaacctgtggactgttggcaaagggatg
cagaagattcgggaagaagacagcaacctgtacttcaacgctaagtcgtcatggcgatgg
tgcgagttctccgcccacccaagggtgatgttgtacgcagacaggacaggggtggagctc
acagacattagggtgaatcctgtctcgaatcacactctgtttcgcatcagcaacacccca
gagtgtcgcagcggggagagacttattctgtccagatatcttggagatgtccatcccttc
cagcacctcatcacgactcagttctcagcctacatcatggatgagcgtttcccctgcatg
cccatgctcaagtgggatcacatgatgcagtccccacccatgttttgtcatgctgtttgt
ggggctaagaccactaaggtcttgctggggtcccacagctctcaggaaatcacaatgctg
cagtactcaggaggcagagcggaggcctgttccactcacggtcctcctcgggccctgctc
agacccagagacagtctgaaacaccttcctgtccagatccctcaccgcctggacatcgct
accagcagattgtcctcacctgctgcaggtctgacttgtattcagaagagaggcggaaga
gaggccggtggcgaggagtgtatctgtatcctgcagctgacggaggcgggagatattttc
taccagatcctcgagcctgagcagcccgacacctgtcgacctccagcggcagatgatgat
cttctgccacaaccaactctaaaagaagtcacaacttcggggagaaaaccagccaaacag
cttcaaccaccttctcagatggttgtatcggacacatcgagcgatgagggtgtaatcgga
ccgactcagggtccaactgtgcagaggtttgtggctgaaacaccagagagggaacaacaa
gtgctgaactcttacaattcctctgaggattccgactctggagggaaaggtcaaaacctg
aagcagtttgggctgcaggtcatcgtcaacgatgatccagagctggatcaagtgtgtgga
ttggaagtaggtgtgaaagatggaaaggtgggtaaagatacagctgataatactgaagaa
cccagcagtttgggtcacattggtccctcggagtggcagactccagtaaagctcagtgac
ggcgctctcatcacgtggaaacattggctccagaaattgatgcgtaagagtcgtgataag
aagccccgtccacgttgcctacagcacttgacggtcaaaactggaggcctcctccaccta
tctgaagatgagagagatgaggcacagagatattcgacaaaagctaagcctgtgcagagc
ctgaggcgtgatctgagagcgtgcatgtccaaacgctcgctgctggttcacagtgctgtc
tccgcctccctcggggctccagatgtggtaatggtgccagacccggtggatacagaagta
tggagagatcagatcagccagcgtctgaccctctcctggcagggggaggaggcgtggcgg
gcgtggtgggaggatcagctggggctgaacagggaggagaaggtggaggctctgaagagg
aaaaggaggagggagaaggaggcgaagagagccaccggccgacgcctgcagctgtccggg
agcttcacctcgtctgtcagctaccagtcagagttgggcgatttttctgattcaacaggc
tggtcctctgcagcgagccagggggcgtggtcagacaccgaaagtaagatgtcccagttg
gagggctctttggagtgcaggacgccaagagcctctacaccctccaccatgcaaactgac
actccagcttacacaccgaccaccacacctcaaagtgttaaagataaacaaggtgaccag
cagactcccagcaggtcccgcacccttgccctgtctcagacaccaaaacctgactccaca
ctggccaatcagaggagcaacaagcgtccagctgaggactacctcagctctctgtttgca
ccacaggatgagccctcgcagcatgacggttatttcctggaacaggggagcactgtgcac
cacccacctccgcctatggccttgtcctcctctcagctccgtagctcccagcctgtccct
cagaggagcctcaggatggatctgtcccaggacaccgccgtctggtcaggtttctcccag
tctcagtccctctcccagagttcacagggtcggatggggctgtcgcaggcgtcccagccc
aagaggaagaagtctcgaatgggattttga
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integrated database retrieval system
