Perca flavescens (yellow perch): 114571256
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Entry
114571256 CDS
T07494
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04120
Ubiquitin mediated proteolysis
pflv04137
Mitophagy - animal
pflv04144
Endocytosis
pflv04340
Hedgehog signaling pathway
pflv04350
TGF-beta signaling pathway
pflv04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114571256
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114571256
04350 TGF-beta signaling pathway
114571256
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114571256
04137 Mitophagy - animal
114571256
09144 Cellular community - eukaryotes
04520 Adherens junction
114571256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114571256
04121 Ubiquitin system [BR:
pflv04121
]
114571256
03029 Mitochondrial biogenesis [BR:
pflv03029
]
114571256
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114571256
Membrane trafficking [BR:
pflv04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114571256
Autophagy
Mitophagy
Other mitophagy associated proteins
114571256
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
HECT type E3
114571256
Mitochondrial biogenesis [BR:
pflv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
114571256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
114571256
NCBI-ProteinID:
XP_028457931
LinkDB
All DBs
Position
2:18718031..18779286
Genome browser
AA seq
775 aa
AA seq
DB search
MSSQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPK
WNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
GPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAEASCPPGEPRIQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRVAMDSQNTNLS
HPTQLKDQGGPGVPQQALSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHC
RIEVCREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPY
YGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLL
GKSITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSVPV
TEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKSFDEKELELIVCGLGKID
ISDWKSNTRLKHCTPESNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAA
GPRLFTIHQIEANTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccaaggagttaggagaaatggcccagtaaagctgcggttgacagtcctgtgt
gcaaagaatctggcaaagaaagacttcttccggttgcctgatccctttgccaaagtggtg
gtggacggctcaggacaatgccactctacagatactgtgaaaaatacgctggacccaaag
tggaatcaacattatgacctatacattggaaaggcagactcaatcaccatcagtgtatgg
aaccacaagaagatccacaaaaagcagggtgcaggtttcctgggctgtgtccgcctcctg
tccaacgccatcaacagactcaaagacactggctatcagagactggacctgaataagctg
ggccccaatgacaatgatactgtgagaggacaaatagttgtaagtcttcagtccagagat
cgcattgggacaggagggccagtggtggactgcagtcgcctgttcgacaatgacttacct
gatggctgggaagagaggaggacagcctctggaaggatacagtacctgaaccacatcaca
cgtaccacgcagtgggagagaccgactaggccagcgtcggagtactccagcccatcaggg
cgtccgctgagctgtgtggtggacgagaacacgccagtgatgacacctgttaatggggcc
gaggccagctgcccgccgggcgaaccgcggatccaggagagacgggttcgatcgcagcgg
catcgtaactacatgagtcgaactcacctgcatacaccgcctgacctgcctgagggttat
gagcaaagaacaactcagcagggtcaagtctacttcctccacacacagactggagtcagc
acctggcatgacccccgggtgcccagggacctaagcaatgtgaactgtgaggagctgggc
ccgctgccaccaggctgggagatcagaaacacagccacaggtcgcgtctactttgtcgac
cacaacaatcgaacaacacagttcacagacccgcgactatctgctaacctgcatctagta
ctcaacccaagtccaaatggttcccgtgtggccatggacagccaaaacactaacctcagt
catcctactcagttaaaggaccagggtggtcctggggtccctcagcaagctctgtctcct
gcccagctgcctgaagaggcagagtgcctgacggtgcccaaatacaagagagacctggtg
cagaagctgaagatcctgcggcaggaactttctcagcaacaaccccaggccggccactgc
cgcatcgaggtctgccgagaggagatatttgaggaatcgtaccggcaggtgatgaagatg
cgtccaaaggatctctggaaaagactgatgatcaaattcagaggagaagagggactggac
tatggtggggtagcaagggaatggttatatctgctctcccatgaaatgctgaacccctac
tacggcctgttccagtattccagagatgacatctacactctacagattaaccccgactct
gctgtcaacccggagcacctgtcctacttccactttgtgggtcgtattatgggcatggcg
gtgtttcacggccactacatcgacggaggcttcactctgcccttctacaaacagctgttg
ggaaaatcgatcacgctggatgatatggagtctgtcgaccccgacctccacaacagcctt
gtctggatcctggacaatgacatcactggcgtcctggaccacactttctgtgtagagcac
aatgcctacggagaaatcatccaacatgagctcaaacccaacggcaagagtgtccccgtc
acggaggacaccaagaaggagtatgtcaggttgtatgtgaactggcgtttcctgcatggc
attgaggctcagtttctggctctgcagaaaggcttcaatgaggttattcctcaacacttg
cttaaatcctttgatgagaaagaactggagctcatagtttgtggcctgggaaagatcgac
atctctgactggaaatccaacacgcgtctgaagcactgcacccccgaaagcaacatcgtc
aagtggttttggaaagccgtggagtcgtttgacgaggagaggagggcccggctactgcag
tttgttactggctcatccagagtcccactgcaaggcttcaaggctttacagggtgctgcg
gggcccagactcttcaccattcatcagatcgaagctaacaccaacaatcttcccaaagcc
catacctgctttaatcggattgacattccgccctacgagagttatgacaagctatacgac
aagctgctgactgcgatcgaggagacctgtggcttcgcagtggaatga
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