Perca flavescens (yellow perch): 114571381
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Entry
114571381 CDS
T07494
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114571381
Membrane trafficking [BR:
pflv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
114571381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
SOS1_NGEF_PH
PHD
Prok-RING_1
Ank_2
PH_13
C1_2
zf-RING_15
DUF7588
Motif
Other DBs
NCBI-GeneID:
114571381
NCBI-ProteinID:
XP_028458083
LinkDB
All DBs
Position
16:complement(24841791..24888956)
Genome browser
AA seq
1733 aa
AA seq
DB search
MATSVRALTRHLVDGEKMEVDRREVPLYGQVEANVRLQANAPEDAEFYVVLQGSSLTHVT
AAKRGDDGLTLCFTVPGHSLVEVVSVTSYFYAEDQVKPCEGEASLEYLRDVAQEAAEYLS
ANRDQLGPQSYLEVLKRFSALVPGADEELFAAGLDCNEEDVRLRQSSGDEAGFRQLDEKI
TQAMANMDYPKQWKNAGSQPREADELQPRETLLHLAVRLGLVHLSRFLIHQPRGQRALTL
PNQEGDAPLQLAQKDGQHAMFRVLAAPPGPVDGPVPGVWCVWSDSSCMLRFCPGMDSLSL
TVRQTPGSRPQDGILILRDRRGDHSILQLINVLKADSEADKRGKEEFLPSDGGISTELRV
EEPALVDNVFEEQLVLSLDDDDEEEYPSSLSVNGHPMQSGGVQSQSPQRATDPLLSMINS
SDQTFTHQTQEEDDDIKCSVREVTRDSTGTDSGLWDAVESDDLLLLATDTPPPYSDDFYT
ASIPCSPPLSPAGQALARLSRPASSEPTDARESPPMDTCDLSLVALEVDSEEDSPEPKSP
LSPLSSDVEKSEDKREILRPSPDLTCTRSQSASACEPATKELGDQGIRLRSYSYSSPKIS
FRPARFPRDNSTSDISPDAVLHNVSHSRSLLQALSLSKSLSLLHPGKQRASSISEQSHEN
RIEEEELDKYNIPTKVESEKYKVIRTFSFLKSRMSSTRNKTKAKGKDREAKDRQLNGHRF
NTGSCLGPTVCVVCEKPASGKDLLHCSSCTTIVHKGCQESVPPCLKKLQDKYAVTMVKTR
TASLPQNFTVRDSPPQCVVPISTSLPLMKDPATQPCLLSGAFPNSDSQLSESSEKESDAW
KVTSRSEELLPTPVSSTSTDSSFGEDCVDACIHSDISADAVDYEAESWSLTVEHKFCKKQ
DKRAVKRQDVIYELMQTELHHLQTLNIMAEVFRRGMREEVQLDAEAVERVFPCLDQLLLF
HHAFFVAMKDRRHSSAQPQGHSNYLIQRIGDVLLQQFSDENSEKMKQVYGEFCSRHNEAV
SFFKELQQHNKRFQNFVKQQGNNSLVRRREIPECILLVTQRITKYPVLLERILKYTQEET
EEHADLSKALAQIREVIAAVDLSVSEYERHQRLQEVWNRMENRSAAKLKNGHTFRKQDMM
GPGQTLKHQGLLLWKTATGRLKDVLALLLTDALIFLQEKDQKFTFATVDQKPPVIALQKL
IVREVANEERGMFLISASAAGPEMYEVHTSSKEERNTWMRLIREAVESCPEEEEEYTSES
EEEKRAAEARIQKINKLQENLLSQDQRICSSLEEKLQVYAELAALSGRNEASLVQPRLLV
QPHSEELPQAAVLLAAAVQEAENLKATLSSKACSPPSPSPDSDTDSVFPVSPATLVEPPS
YWLSDTNDIDFKVAQSVQSLTKLLYSVQAAVTIQDSCYEVQRLLLQETGRPSPRAQRPHL
PSIRGNTLQEQEKQRNLEKRKEEVAAAQRLQNRLRQEKERWERECQARESQQGQQESRLE
ERERQCHLETERLRRERDELDEQLEEYQQSLERLREGQRNVERERERLESQQKLLQTWRH
SRQSSLPTVIPPMVIPLDGQQDSTPSQSRDHAGNGSVFVNEAAFANTSVNNRHVHHKRND
PNAHNCLNTLLARSNSRHVSIAKAPHRPHSDSQGWVMGTGYLCSPAGRLGLQQTPSDDRH
SYISETWSSTASGANPYPVLPHPSDPQLDLRALVSLETESGAEEGSEETIVYL
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttcagtgcgtgctctcacaaggcatctggtggatggagagaaaatggaggtg
gacagaagagaggtgcctctatatggacaggtggaggcgaatgtgaggttacaagccaac
gctcccgaagacgcagagttttatgtcgttttacaaggctctagccttacacatgtgact
gcagcaaaaagaggagatgatgggctgactctttgcttcacagttcccggccattccctt
gtggaagttgtctctgtcacatcctacttttacgcagaggaccaagtcaagccatgcgag
ggtgaagcatctcttgaatacctcagagacgttgcccaggaggcagcagaatacctgagt
gcaaatagggaccagcttggcccccagagctacctagaagtcctgaagaggttttccgcg
ttggtgccgggagctgatgaggagctcttcgctgcaggcctggactgcaatgaggaggat
gtgcggctcagacaaagttcaggtgatgaagcaggtttcaggcagctggacgagaagatc
acgcaggctatggccaacatggattaccctaagcagtggaaaaatgccggcagtcagccg
agagaagctgatgagcttcagcccagagaaaccctccttcaccttgcagtgcgtttgggt
ttggttcatctctcccgtttcttaatccaccaaccaagaggtcaacgggcattgacctta
cccaatcaggagggagacgcgcctctccagttggctcagaaggacggacagcatgccatg
ttcagggtgctggcagctcctccaggtcctgttgacggccctgttccaggtgtgtggtgt
gtgtggtccgacagctcctgcatgctgaggttttgtcccgggatggactccctgagcttg
actgtgcgacagacacctggcagccgccctcaggacggcatcttgatcctccgagacaga
cggggagaccacagcatcctccaactgatcaatgtgctcaaagctgacagtgaggcagac
aagagaggcaaagaggaattccttcctagtgatggaggaataagcacggagctccgagtg
gaagagcccgcactggtggacaatgtttttgaagaacaacttgttctttctttggatgat
gacgatgaagaagagtacccatcctctttatccgtaaatgggcatcccatgcagtctggt
ggagtccagagccagtcgccgcagcgtgctacagaccctctgctctccatgatcaacagc
agcgatcagaccttcacacatcagacacaggaagaagatgacgacatcaagtgtagcgtc
cgtgaagtgaccagggacagcacagggacagacagcgggttatgggacgcggtggagtca
gacgatctcctgctgctagccactgacactcctcctccctattcagacgatttctacact
gcctctataccctgctctcccccactctcacccgctggccaggcactcgccaggctgagc
cgccccgcctcctctgagccgaccgatgcgagagaaagtccgcccatggacacctgcgac
ctcagtctggtggctctggaagtggacagtgaagaggacagccctgagccaaagtctccg
ctttccccgctctcgtcagatgttgagaaaagtgaagacaaaagggaaatccttcgtccc
tcccctgacctcacgtgcactcgcagccaatctgcctcagcatgtgaacccgccacaaaa
gaattgggtgaccaggggattcggctgcgttcgtattcctactcttcccccaaaatcagc
ttccgtcctgctcgttttccccgggacaacagcacatcagatatcagccctgatgccgta
ctccacaatgtcagccacagccgatctctccttcaggccctctctctgtctaaatctctg
tctcttctccaccctggtaagcaaagagcatccagtatatcagagcagtcccatgaaaac
agaattgaagaggaggagttggataaatacaacatcccgacaaaggtggagtcagagaag
tacaaagtcattcgcaccttcagttttctcaagagcaggatgtccagcacgcgcaacaag
accaaggcaaaggggaaggacagagaggccaaggataggcagttgaatggacatcggttt
aacacagggtcctgtttgggccccactgtgtgcgtggtgtgtgagaaaccggcatctgga
aaagacctgctgcattgctccagttgcactactatcgtccataagggctgtcaggaatct
gtccccccatgtttgaaaaaacttcaggataaatatgccgttaccatggtgaaaaccagg
acagcatccctcccacagaatttcacagtgagagacagtcctcctcagtgtgttgtcccc
atctctacctctctaccgctcatgaaagaccctgcgacccagccgtgcctactctctggg
gctttcccaaacagtgacagtcagctcagtgagagttcagagaaagagtctgatgcctgg
aaggtgaccagccgatcagaagagctcctgccgactccagtgtcctcaacttccactgac
tcatccttcggagaagactgcgtggacgcgtgcatccacagtgacatctcggccgatgct
gtggattacgaggctgagtcgtggagtctgactgtggagcacaagttctgcaagaagcag
gacaaacgagccgtcaagaggcaggatgttatctatgagctgatgcagaccgagcttcac
cacctacagacgctaaacatcatggccgaggttttccggcgaggcatgagggaggaagtg
cagctagatgcagaagcggtggagcgggtcttcccctgtctggaccagctgcttctcttc
caccacgccttcttcgtcgccatgaaagatcggcgacacagctccgcccaaccccaggga
cacagcaattacctcatccagcgaataggagacgtcttgctccaacagttttcagatgag
aatagcgagaaaatgaagcaggtgtacggagagttctgcagtcgccacaacgaagcggtc
agctttttcaaagagctccagcagcataacaagagatttcagaactttgttaagcaacaa
ggtaataattctttggtgagacggagggagatcccagagtgcatcttgctggtaacccaa
aggattaccaagtacccagtgctcttggagaggatcctaaaatatactcaagaggaaacc
gaggagcatgcagacctttcgaaagcactggctcagattcgagaggtgatagcagccgtg
gacctcagcgtcagcgaatacgagcggcatcagaggttacaggaagtgtggaaccgcatg
gagaaccgcagcgcagccaagctgaagaacggccataccttccgcaagcaggacatgatg
gggccgggacaaacgctcaaacaccagggcctgcttctgtggaagactgccaccggtcga
ctcaaagatgtcctggctctccttctcacagatgcactcatctttctgcaagaaaaagac
cagaagtttacctttgccacagtggatcagaagcctccagtcatcgcactgcagaagtta
atagtgcgagaagtagcaaacgaagagagggggatgtttttgatcagcgcgtcagccgcc
gggccagaaatgtacgaggtccacacatcatccaaagaggaacggaacacctggatgagg
ctcattagagaggctgtagagagctgtccggaggaagaagaagaatacacaagtgaatct
gaagaggagaagcgagctgccgaggcgcgcattcagaagatcaataagctacaagagaat
ctgctgagccaggaccagcggatctgctccagcctggaggagaagctgcaggtctacgca
gagctcgctgctctgagtgggaggaacgaagcctcgctggtccaaccgcgactgctcgtc
cagccgcactccgaggagctgccccaggctgccgtgttgctggctgcagctgtgcaagag
gctgagaacctgaaagccacgctgtcatccaaggcctgttctccaccgagccccagcccg
gactctgacaccgactctgtgtttcctgtcagccctgctacgcttgtagagcccccctca
tactggctctcagacacgaatgacatcgacttcaaggttgctcaaagtgtccaaagcctg
accaagttactctacagtgtgcaggccgcagtgaccatccaggacagctgctatgaggtc
cagaggctgctcctccaagagactgggcgtccttccccccgcgcccagcggccgcacctt
ccgagcatccggggcaacaccctacaagaacaggagaagcagcgtaacctggagaagcgg
aaggaggaggtggcggcggctcagcggctccagaaccgactgcgccaagagaaggagcgc
tgggagagggagtgccaggccagggagagccagcaggggcagcaggagagcaggctggag
gagagggagaggcagtgccacctggagacggagaggctgaggcgcgagagggacgagttg
gacgagcagctggaggagtaccagcagagcctggagcggctcagggagggccagagaaac
gtggagagggagcgcgagcgtctggagagccagcaaaagctgctccagacctggagacac
agccggcagagtagtctgcccactgtgattcctcccatggtcatccctctagatgggcag
caggactcgacaccaagtcagtccagagaccacgccggtaacggctccgtgtttgtgaac
gaggctgcgttcgccaacaccagcgtcaacaatcgccacgtccaccacaaacgaaatgac
cccaacgcacacaattgtctcaacaccctgctggcaagatccaacagcagacatgtctcc
attgctaaggctccccacagaccacactccgactcccagggatgggtgatgggcacagga
tacctgtgcagccctgcagggaggctggggctgcagcaaacacccagtgatgaccgtcac
agctacatcagtgagacctggtcatcaacggcaagtggagctaacccatatccggtgctc
ccacatcccagtgaccctcagctggacctccgtgcactggtttccttggagactgagagc
ggagcggaggagggcagtgaggaaaccattgtgtacctctga
DBGET
integrated database retrieval system
