Perca flavescens (yellow perch): 114571399
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Entry
114571399 CDS
T07494
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03420
Nucleotide excision repair
pflv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114571399 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
114571399 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pflv03051
]
114571399 (rad23b)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114571399 (rad23b)
Proteasome [BR:
pflv03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
114571399 (rad23b)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
114571399 (rad23b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
Dsc3_N
UBA_3
CUE
OTU1_UBXL
Ubiquitin_5
Ubiquitin_4
Metal_resist
Motif
Other DBs
NCBI-GeneID:
114571399
NCBI-ProteinID:
XP_028458119
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Position
16:20685085..20692403
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AA seq
383 aa
AA seq
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MQITLKTLQQQTFKIDIDEEETVKTLKERIEEEKGKEHFSVAGLKLIYAGKVLSDDTALK
EYKIDEKNFVVVMVTKAKTASAAPQPSPATSASSAAAPAAPPASSSSSENTSVPTSTDDK
PEERQSPTAEPASTPVGSSEASTNTNLINEAVSNLVTGPSYDAMVNEMMLMGYEREQVVA
ALRASFNNPDRAVEYLLTGIPGRDSGRASGPEAVVPPVSGVSTAPIGGISLPANTGSSSA
GGGNPLSFLRNQPQFHVMRQLIQQNAALLPALLQEIGRENPELLQEISSHQEQFIQMLNE
PNPEAVPAGGGAGGAVGAGGIAGDAPGGSHMSYIQVTPLEKEAIERLKALGFPEGLVIQA
YFACEKNENLAANFLLQQNFDDD
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcagataactttgaaaaccttacagcagcagacgttcaaaatcgacatcgatgaagag
gagacggtgaagaccttaaaagagaggattgaagaggagaaaggaaaggaacatttctca
gtggctggattaaagctgatttatgctgggaaagtcctcagcgatgacacagccctcaaa
gaatacaaaatcgatgaaaagaactttgtggtcgtcatggtgacaaaggctaaaacagca
tcagccgccccgcagccttcacctgccacttcagcttccagcgctgcagctcccgcagcg
cctcctgcatcatcgtccagctctgaaaacacatcagtgcctacctctacagacgacaaa
ccagaggagaggcagtctcccactgctgaaccagcttccacccctgtcggaagctctgag
gcttcaacaaacactaacctgattaatgaggcagtttcaaatctagtgacgggcccatca
tatgatgccatggtgaatgagatgatgctcatgggctacgagagggagcaggtggtagca
gctctgagagctagcttcaacaacccagaccgagctgtggagtacctgctcacaggtata
ccaggcagagattcgggccgtgcatcaggacctgaagcggtggtgcctccagtgagtgga
gtttctactgcacccataggtggtattagccttcctgccaacactggctcttcaagtgct
ggaggaggcaaccccttgagtttcctaagaaatcagccccagttccacgtgatgcgacag
ctgatccagcagaacgctgccctgcttcctgccctgctgcaggagatcggcagggaaaac
cctgagctgttgcaggagattagcagccaccaagagcagttcatccagatgctgaatgaa
cccaacccagaggcagtgccggctggaggtggagcaggaggagctgtgggggctggaggg
atagcaggtgatgcacccggtgggagtcacatgagctacatccaggtcacgccactggag
aaagaggcaattgagaggctaaaagctttaggatttccagagggactcgttatacaagcc
tactttgcttgtgagaagaacgagaacttggccgccaacttccttttacaacagaacttt
gatgatgattaa
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