Perca flavescens (yellow perch): 114571536
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Entry
114571536 CDS
T07494
Symbol
brcc3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03440
Homologous recombination
pflv04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114571536 (brcc3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
114571536 (brcc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pflv01002
]
114571536 (brcc3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114571536 (brcc3)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114571536 (brcc3)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114571536 (brcc3)
Peptidases and inhibitors [BR:
pflv01002
]
Metallo peptidases
Family M67
114571536 (brcc3)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
114571536 (brcc3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
114571536 (brcc3)
BRISC complex
114571536 (brcc3)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
114571536 (brcc3)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
114571536 (brcc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
114571536
NCBI-ProteinID:
XP_028458330
LinkDB
All DBs
Position
16:6770667..6772829
Genome browser
AA seq
261 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVEVTRIVHIYSVIILRRSDKRKDRV
EISPEQLSAASTEAERLADITGRPLRVVGWYHSHPHITVWPSHVDVRTQAMYQMLDQCFV
GLIFSCFIEDKNTKTGRLLYTCFQSVQAQKGSEYERVEIPVHVVPREAIGKVCLESAVEL
PRILCQEEQDTYRKIHSLAHLDPVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNK
QSIAELQREKERLLQELAVQP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgagcgccgttcacctggagtcagacgcctttctggtgtgtatgaatcacgcg
ctgagcacggaaaaagaagaggtgatgggtttgtgtatcggagaagtggaggtcacccgt
atcgtccatatttactccgtcatcatcctccgccgctcggacaagaggaaggaccgggtg
gagatctcccccgagcagctgtccgcggcctccacggaggcggagaggctggccgacatc
accggcaggccgctgcgggtggtcggctggtaccactcccacccgcacatcaccgtgtgg
ccctcccacgtcgacgtgaggacccaggccatgtaccagatgctggaccagtgcttcgtg
ggcctcattttctcctgcttcatagaggacaagaacaccaagacgggccggttgctgtac
acctgcttccagtccgtgcaggcgcagaagggctccgagtacgagcgcgtggagatcccc
gtgcacgtcgtgccccgcgaagccatcggcaaggtgtgcctggagtcggccgtggagctg
ccgcggatcctgtgccaggaggagcaggacacttaccgcaagatccacagcctagcgcac
ctggaccccgtcaccaagatccacaacggctcggtgttcaccaagaacctgtgcagccag
atgtcggcggtgagcgggccgctgctgcagtggctggaggaccggctggagcagaacaag
cagagcatcgcggagctgcagcgggaaaaggagaggctgctgcaggagctggctgttcag
ccatga
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integrated database retrieval system
