Perca flavescens (yellow perch): 114571589
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Entry
114571589 CDS
T07494
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114571589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114571589
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
114571589
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Ortholog
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GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
HAP1_N
XLF
DUF3859
ERM_helical
PH_4
CENP-K
Exonuc_VII_L
bZIP_2
Motif
Other DBs
NCBI-GeneID:
114571589
NCBI-ProteinID:
XP_028458435
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Position
16:complement(30202724..30243914)
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AA seq
334 aa
AA seq
DB search
MHVSVREVHVSSEPDSSFFLRVDWKGRGLGSGFQVLLTDGQDAWRGDVSEAAVCQEAEEL
EMAPERYILDLEQALTGTQSSATYSFTLAPSPPDRRAALTLAYEKVQKDISFRLGSVLLK
AVPEPAEAVSEFLIHSLQRGNKLERLNQKLDEENQRLRQEQQRITTELKRYAEGKETLET
ELYSRFVLVLNEKKAKIRSLQEAVTHLQETSSRGQKKEDSVKSDRTAGQEEDDYEGSTDE
EPEEVKSTAAASTSSTRGRSSASPLDDSLKDIPDVAPCRKRRLRHLEAPDAEQPSSHRKR
TNPQGGSSKHQIPPQRSTDAAAPNANVEDLFDDF
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgtcggtgcgggaagtccacgtttcgtcggagccggactcctccttcttcctg
cgggtggactggaaggggcggggcttaggttcgggcttccaggtgctgctgactgacggg
caggacgcttggagaggagacgtgagcgaggctgcggtgtgccaggaggcggaggagctg
gagatggctccggagaggtacatcctggacctggagcaggcgctcaccgggacccaaagc
tccgccacgtacagcttcacgctggcgccgtctccccccgaccgccgcgccgcgctcaca
ctggcctacgagaaggttcagaaggacatctcttttcgcttgggttctgttctgctgaag
gccgtcccggagccggcggaggctgtgagcgagttcttgatccacagcctgcagcgggga
aacaaactggagcgccttaaccaaaaactggacgaggagaaccaaagactgagacaagaa
cagcaacgcatcactacagaattgaagcgttacgccgagggtaaagaaaccctggaaaca
gagctgtactctcggtttgttttggtcctgaatgagaagaaagctaagatccgaagtcta
caggaagctgtcacacacctgcaggaaaccagttcgagaggacagaaaaaggaggattca
gtcaaatcggaccggacggccggtcaggaagaggatgactacgaaggaagtaccgatgag
gagccggaggaagtgaagtcaacggcagcagcctccacgtcatcgacccggggacgctcc
tctgcgagcccattggacgacagcctgaaggacatcccagacgtggccccctgtcgcaag
cggcgcctccgccacctcgaggcgccggacgccgagcaaccgagctcccacagaaagagg
accaacccccaaggaggatccagtaagcatcagattcccccgcagcgctctacagatgct
gctgcaccaaatgctaacgttgaggatctgtttgatgacttttga
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