KEGG   Perca flavescens (yellow perch): 114571708
Entry
114571708         CDS       T07494                                 
Symbol
msh6
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    114571708 (msh6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pflv03400]
    114571708 (msh6)
DNA repair and recombination proteins [BR:pflv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     114571708 (msh6)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP
Other DBs
NCBI-GeneID: 114571708
NCBI-ProteinID: XP_028458624
LinkDB
Position
17:14305740..14314328
AA seq 1373 aa
MAKQSSLFNFFKKSPPPVSKPKPSLSPAEADLPSSVEKSSSPKEQAKQTPQQLTKTNKVK
PKSTKSSKGGFNKLFGDTAPTTKPSNTCPFSAGVLVWAKLEGHPWWPCMVVPQPLTGQQM
RGRGRDQRIHVHFFDEPPTRGWVSTKYIREYQGSDSSDAKTGGVFFSGKPVIRHAMELAD
GVMFDSPEKRLKMPLCMDPSDEEDDEEMELDKSTLTDEEVSDEEEEENENVKLSEVSRRS
SRASTEKGNKAKRRRIVVASDSDGSDEEFKPEQAASSSEDELEEAAAVSSEEESTHESEA
ESPIKLVKRKRPAEKPASTKAKMPTTPSTAPKRAPAAVAVDTKSRLSAFSAPDNFESQAN
GSGTVGSATIWDHEKLEWCQDGRRKDSRRRRQTDDDYDPTTLYVPEDFLNRNSPGMRRWW
QLKSEMFDTVIFYKVGKFYELYHMDAVIGVNEMGLTFMKGTWAHSGFPEIGFGRFSDVLV
QKGYKVARVEQTETPEMMEARCKSMAKPTKFDRVVRREVCRIITRGTQTYSVLDGAPSES
QSKFLLSVKEKAEEESSGRCRTYGVCFVDTSVGYFHVGQFPDDRHCSRLRTLIAHFAPAE
VLFERGNPSVETRKIFKASLSSALQEGLNAGTQFWDAQKTLKTLSEEDYFRETAGKEQGK
GNNFLPAPLKKMTSESDSLCLTPKESYELGLSALGGCIFYLKKCLVDQELLSLANFEEYV
PVDVELEKAAEPASFFAQTRQRVVLDAVTLANLEIFQNGSGGREGTLLERLDTCSTPFGK
RLLKQWLCAPLCNPTSIKDRLDAVEDLIGAQAQATEVSDLLKKLPDLERLLSKIHSIGTL
KGQDHPDSRAVLYEEVTYSKRKIADFLSALEGFKTMQEIITVLTPVTAQSRSALLRQVAS
LQSEKDGLFPDLSAELRRWETAFDHQKARTTGVITPKAGFDPEYDQALASIKNCERELQD
YLDRQKKRIGCKSMSYWGTGRNRYQMEVPDSVSERNIPEEYDVKSTKKGWKRYVTKETER
LFSELQAFEEKRDAALKDCMRRLFYNFDKNYKDWKTGVECMAVIDVLLSLSRYSQGGDGP
MTRPQVVLPEGDDQVVAFLDLTGSRHPCVTKTFFGDDFIPNDIYIGCPGSDETDEKKEHA
SCVLVTGPNMGGKSTLMRQCGLVIILAQLGCYVPAESLRFTPVDRVFTRLGASDRIMAGE
STFFVELSETASILHHATKHSLVLVDELGRGTATYDGTAIASAVVKELAEKVCCRTLFST
HYHSLVEDYANNPAVRLGHMACMVENECEDPSQETITFLYKFITGACPKSYGFNAARLAS
LPEVVIQSGHRKAREFEKSTISLRLFKKLCQFADDPTLSKTHFASLVQMLNTI
NT seq 4122 nt   +upstreamnt  +downstreamnt
atggcgaagcaaagctcccttttcaatttcttcaagaagtctccgccgccggtctccaag
ccgaagccgagtctctctccggccgaggcagacctgccttcctccgtagagaagtcctct
tctccgaaagagcaagctaaacagacaccgcaacaactaaccaagaccaacaaagttaag
ccaaaaagcaccaagtcttcgaaagggggattcaacaaactgtttggcgacacggcccca
acaaccaaaccaagcaacacatgcccattcagtgctggtgtccttgtgtgggctaaactg
gagggacacccctggtggccatgcatggtggtaccccaacctctgactggacagcagatg
aggggccggggtcgagaccaacgcatacatgtccatttctttgatgaaccccccactaga
ggatgggtcagcaccaaatatatccgagagtaccaaggctctgacagcagtgatgctaaa
acgggaggagtgttcttcagcggcaaacctgtcatccgtcatgcaatggagctcgctgat
ggagttatgtttgacagccctgaaaaaagattaaagatgcctctctgtatggatccatcc
gatgaagaggatgatgaagaaatggagcttgacaagtcaacattgactgatgaagaggtt
agtgatgaggaagaagaggaaaatgagaacgtgaaattgtccgaggtcagtcgacgttca
tcccgtgcgtcaacagagaagggaaataaggccaagcgccgccgcatagttgtagcttca
gacagcgatggatcagatgaggaattcaaaccagagcaggctgcgtccagcagtgaggat
gagctggaagaagcagcagcggtgagcagtgaagaggagagcacacatgagtcggaagca
gaaagccccatcaagcttgtaaagcgcaaacgtcctgccgaaaagcctgcttctacaaaa
gccaagatgcctactaccccgtctactgctccaaaacgtgctccagcagctgttgcggtc
gacacaaagtctcgtctgtcagccttctctgcccctgacaactttgagagccaggcaaat
ggatcaggcaccgttggaagcgccacaatttgggaccatgagaagctggagtggtgccag
gatggcaggaggaaagacagccgacggcggcgacagaccgacgatgactatgatcccacc
acgctgtatgtaccagaagactttctaaaccgaaacagtcctggtatgcgtcgctggtgg
cagctcaaatctgagatgtttgatacggtcattttctacaaagtggggaagttttatgag
ctctaccacatggatgctgtgatcggcgtcaacgagatgggactaacgttcatgaagggg
acctgggcacactccggcttcccagagattggctttgggcgtttctcagatgtgctggtc
cagaaaggctacaaggtggctcgtgtggagcagacggagaccccagagatgatggaagca
cgctgtaagagcatggctaagcccacaaagtttgaccgtgtggtgagaagagaagtgtgc
cggattatcacacgtggtacccagacatacagtgtgttagacggtgcgccttctgagagt
cagagcaagttcctgctgagtgtaaaggaaaaggctgaagaggaaagctccggtcgctgc
cgtacatacggagtctgctttgtggatacctctgtgggttattttcacgttggtcagttc
ccagacgatcgtcactgctcacgtctgcgcaccctaatagcacactttgcccctgctgaa
gtgctctttgaaaggggaaacccatccgttgaaacgcgcaaaatattcaaggcctctctg
tcctctgctttgcaggaaggacttaatgccggcacccagttctgggatgctcagaagact
ctgaaaaccctttcagaagaagattactttagagagactgctggcaaggaacaagggaaa
gggaacaactttcttcctgctcctctaaaaaagatgacctctgagagtgattccctgtgc
cttactcccaaagagagctatgagctgggactgtcggcactgggtggatgcattttctat
ctgaagaaatgtctggtagaccaagagctgctctctttggccaactttgaagaatatgtc
cctgttgatgttgagctggagaaagctgcagaaccggccagtttctttgcccaaactcgt
cagcgggtggtcctcgatgcagtgactctggcaaacttagaaatctttcagaatgggtca
ggaggaagagaagggacgctgctggagcgtttggacacctgctctaccccgtttggcaag
aggctgctgaagcagtggctctgtgcgcctctgtgtaaccccacatccatcaaggaccga
ctggatgcagtggaagacctgattggagctcaggcccaggctactgaggtttcagacctg
ctgaagaagctcccagatttggagcgtcttctgagcaaaattcacagcattggcactcta
aagggccaggatcaccctgacagcagagcagttctctatgaggaggtcacctacagcaag
cgcaagatagcagacttcctctcagcactggaaggtttcaaaactatgcaggagatcatt
actgtcctcactccggttacagcccaatctcgatccgcattgctccgtcaagtggccagt
ctgcaaagtgaaaaggacggcctctttcccgacctctctgctgaactcaggcgctgggag
acagccttcgaccaccagaaagcccgcactactggtgtcataacgcctaaagctggcttt
gaccccgagtacgaccaggctctggcgtccatcaagaactgtgagcgagagctgcaggat
tacctggacagacagaagaagaggattggctgtaagagcatgtcctattggggaaccggg
cgaaaccgctaccagatggaggtgcctgacagtgtctcagagaggaatattcccgaggag
tacgacgtgaagtctacaaagaaaggctggaagcgttatgtgaccaaggagaccgaacgg
ctgttctcagagctgcaagcatttgaagagaagagagatgctgccctgaaagactgcatg
aggaggcttttctacaactttgacaagaactacaaagactggaagactggtgtggagtgc
atggcagtgattgatgtgctgctgtccttgtcccgctacagccagggcggagacggcccg
atgaccaggccacaggtggtgctccctgagggggatgaccaggtagtggccttccttgac
ctcactggatcccgccatccctgtgtcaccaagaccttttttggcgacgacttcatcccc
aacgacatctacattggctgccctggtagcgatgaaactgatgagaaaaaagagcatgcc
tcttgtgtcctcgtcacggggccaaacatgggtggaaagtcaactctcatgagacagtgt
ggacttgtgatcatccttgctcagctgggttgctatgttcctgccgagagtctgcgcttc
acaccggttgacagagtcttcactcggctgggagcctcggatcgtatcatggctggagag
agtaccttctttgtggagctaagtgagactgccagcatcttgcaccatgccactaaacac
tcgcttgtgctcgtggatgaattaggaaggggcacagccacatatgatggcacagcgatt
gccagtgctgttgtgaaggagcttgctgagaaggtctgctgtcgcaccctcttctctaca
cattatcactccctggtggaggactacgccaacaaccctgctgtgcgtttgggccacatg
gcatgcatggtggagaatgaatgcgaggatccaagtcaagagacaatcacattcctctac
aagttcatcactggcgcttgtccaaagagttatggcttcaatgctgctcgactggccagc
ctgccagaggtggtcatccaatcaggacacaggaaggccagagagtttgagaagagcacc
atcagcctcagactcttcaagaagctctgccagtttgctgacgatcctacactgagcaag
acacactttgcttcacttgttcagatgctcaacaccatatag

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