Perca flavescens (yellow perch): 114571895
Help
Entry
114571895 CDS
T07494
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114571895 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114571895 (dis3)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
114571895 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
114571895
NCBI-ProteinID:
XP_028458963
LinkDB
All DBs
Position
17:21880949..21890301
Genome browser
AA seq
953 aa
AA seq
DB search
MLKSKTFVRKTRSGGVMKIVREHYLRDDIWCGSEVCAECKQESTVLQRDACIESNLCSYP
HYVIPDTNVVLHQIDVLEDPVIRNVIILQTVLQEVRHRSAPVYKRLKDMIHEKEKFFYAF
TNEHHRETFIEREPGESANDRNDRAIRVAAKWYSQHLKTSESDADGLKVVLLTNDQGNKQ
KAEESGLLVYKCEEYIKSLIGNPELVDRLALSNDDKHDITSSKVLFPEHLPLSKIQAGIK
SGAFVQGTFRASRDNYLEATVFVQGDGDESTEILIQGLQNLNRAVYQDVVAVQLLPQNQW
VAPSSVVLQDEGAAKDDEEEKEEEDEEKALRISAAEAARKPTGKVVGIIKRNWRPFCGML
NISQIKESTRHLFTPADRRIPRIRIETRQASTLAGQRIMVAIDGWPKHSRYPNGHFVRSL
GNAGEKDTEQEVLLLEHDVPHQDFSQAVLSFLPKMPWTITPEDMARREDLRNLTVCSVDP
PGCTDIDDALHCRELDNGNLEVGVHIADVSHFIRPGNAMDREAASRGTTVYLCGKRIDMV
PELLSSNLCSLRSNVERLAFSCIWEMNHKAEILKTRFTKSVINSKASLTYAEAQMRIDDT
TKNDDITKSLRGLNKLAKILKRQRIEKGALTLSSLEVRFHIDSETHDPIDLQTKELMETN
SMVEEFMLLANISVAQKIYDEFPDCAMLRKHPAPPPSNYDILLKAAKSKDVEIHTDTAKA
LADSLDVARVDGFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIR
RYADIIVHRLLAVAIAADSTYPDLMDKQKQSALANNLNYRHKMSQYAQRASVAFHTQLFF
KSRGILNEEGFVLFVRKNAIIVLIPKFGLEGTVFFDAKDKAGPKLVFDEEGPTLNVEQHT
FRIFDKVKVTISLDASNIQHQKIRMSLIDPVIPGVSVPAPEVEPQTKKPKLDR
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatctaaaacctttgtgaggaagacccggtcgggtggggtgatgaagatagtg
cgcgagcattatctgagagatgatatttggtgcggaagcgaagtttgcgctgaatgcaaa
caggagtccacggtgttgcagagagacgcatgtattgagagcaacttgtgctcttatcca
cattatgtgatccctgacacaaatgtggtgctgcatcagattgacgtgttggaagaccct
gtgattcgtaatgtgataatccttcagactgtgctgcaggaggttcgccaccgcagtgca
ccggtctataaacgcctgaaggacatgatacatgagaaagagaaattcttctatgctttt
accaacgaacaccaccgagagacatttattgaacgtgaaccgggggaaagcgccaatgac
cgtaacgaccgtgcaatccgtgtggcggcaaaatggtacagccagcacctgaagacgtct
gagtccgacgcagacggactcaaggtggtcctccttaccaatgatcaagggaacaagcaa
aaggcagaggagagcggcctgctggtttacaaatgtgaggagtacatcaagagtctgata
gggaaccctgagcttgtagatcgtctggctttgtccaatgatgacaagcatgacatcact
agcagtaaggtgttattcccagagcacctccctctgtccaagatccaagcaggaattaag
agtggcgctttcgtccagggcacctttagggccagcagggacaactatctggaggccaca
gtctttgtccagggagatggggacgaaagcacagagattctcatccagggtcttcagaat
ctcaacagagccgtttaccaggatgtggttgccgtgcagctgttgccacagaatcagtgg
gtggcgccctcatcagtcgtgctgcaggatgaaggggcagcaaaggatgatgaggaggag
aaagaggaggaggacgaggagaaagcgttgaggatatcagcagctgaagcagccaggaag
cccacaggcaaagtagtgggaatcatcaaaaggaactggaggccattttgtggcatgctc
aatatctcccaaattaaagagtcaacccgccatcttttcaccccggctgaccgccgtatc
ccacgcattcgcattgaaacgcgtcaggcatccacactggcaggccagaggatcatggtg
gccatcgatggctggcccaaacactctagatatccgaatggtcactttgtgcgcagtctg
ggaaatgcaggggagaaggacacggagcaggaggtgctgctgctggagcatgacgtcccc
caccaggacttttctcaggctgtgctcagtttccttcccaagatgccgtggaccatcaca
ccagaggacatggcgaggagagaggacctgaggaatctgacagtgtgcagtgtggatcct
ccgggatgtacagacattgatgatgccctacactgtagagagctggacaatggaaacctt
gaggtgggcgtccacatcgctgatgtcagtcacttcatcagacctggcaacgctatggac
agagaggctgcgagccgtggcacgactgtctacttgtgtggcaaaaggatagatatggtt
cctgagctgctcagctccaatctttgttctctacgctccaatgtggaaaggctggccttc
tcatgtatctgggagatgaaccacaaggctgaaattcttaagacccggttcacaaaaagt
gtcattaactccaaggcatctttgacctacgctgaggcccaaatgaggattgatgacacc
accaagaatgatgatatcaccaagagcctgcgaggtctcaacaaacttgccaaaatcctc
aagaggcagaggatagagaaaggggcgctgacgctgtcatccttagaggtccgtttccac
atagacagtgaaacccacgaccccattgacctgcagacaaaagaactcatggagacaaac
tccatggtagaggagttcatgttgctggccaacatttcagttgcccagaagatttatgac
gaatttccagactgtgccatgctgaggaaacatccagcaccaccaccatcgaactacgac
atcctgctcaaggctgcaaagtccaaggatgttgagatccacacagatacggccaaggca
ctggctgactcccttgacgtggccagagtggatggcttcccgtacttcaacacgctcctg
cgcatcttggccactcgctgcatgatgcaggcggtctatttttgttctggcatggacagt
gattttcaccactacggccttgcttcacccatttatacacacttcacgtcacctattagg
aggtacgcagatattatagtacaccgcctgctggcagtggccatagcagcagacagcacc
tacccagatttgatggacaaacaaaagcagtcagctctcgccaacaacctcaactacaga
cataaaatgtctcagtatgcacagagagcatctgtggccttccacacacagttgttcttc
aagagccgaggcatactgaacgaagagggatttgttctgtttgtgaggaagaacgcaatc
atcgtactcatcccaaagtttggcctggagggaacggtgttctttgacgccaaagacaag
gcgggcccaaaacttgtttttgatgaagagggtcccactctgaacgtagagcagcacacc
ttccgcatatttgacaaggtgaaagtcaccatcagcctggacgcctccaatattcagcac
cagaagatccgcatgtctctgatcgaccccgtgatccctggtgtgagtgttccagcccca
gaggttgaaccacagaccaagaaaccaaaactggaccgctga
DBGET
integrated database retrieval system
