Perca flavescens (yellow perch): 114572017
Help
Entry
114572017 CDS
T07494
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04010
MAPK signaling pathway
pflv04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114572017 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
114572017 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114572017 (nfkb2)
Transcription factors [BR:
pflv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
114572017 (nfkb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Motif
Other DBs
NCBI-GeneID:
114572017
NCBI-ProteinID:
XP_028459197
LinkDB
All DBs
Position
17:33450238..33486078
Genome browser
AA seq
539 aa
AA seq
DB search
MAGALRMTEAQFINVYDNELQMNLMQYDYIPPVDIKTEPYIPETAHGPYIQIIEEPKQRG
FRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVTHSDPPRVHAHSLV
GRHCTENGTCTMDVGPNDLAASFSNLGILHVTKKGVVEVLSRRLRDERKRQKGPLGHFTD
AEEVSIQKEAKELGKVMDLNIVRLKFTAYLQDSNGGFTRGLKPVVSNCIYDSKSPNASNL
KISRMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTDVHKQYAI
VFKTPPYHSAEIERPVTVFLQLKRKKAGDSSDPKQFTYIPQVQDKEEVLRKKQKPLPHYE
PWRGGGGGGRGGGAGGFGGGGAGGGGFQFNQMNGGTGGGGGGGVFFTTNFTGFGGGAQMP
GSGPHTGTDGQTTGQTGSPLQQQLFQIAATLHSRASQSARHMAAALLQYCSTGDARVLLA
IQRHLCGVQDANGDTPLHLAIIHQQSGVIQQLIHTLLSSRQHNLLNTANHLQQVTISNR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagctctcaggatgactgaagctcagttcatcaacgtctacgacaacgagctg
cagatgaatttgatgcagtacgactacattcctccggtggacataaagactgaaccctac
atacctgagacagctcatggtccttacattcaaatcatcgaggagcccaaacagaggggc
tttcgtttccgttatgagtgcgagggcccgtcccacggtgggctgccgggggcctccagc
gagaagaaccggagaacctaccccactgtgaagattaataactacgtgggtcacgcccgg
gtggaggtccagctggtgacgcactcggatcccccacgcgtccacgctcacagtctggtg
ggacgccactgcaccgagaacgggacctgcaccatggacgtgggccccaacgacctcgct
gcctcgttcagtaacctggggatcctccacgtgacgaagaaaggcgtggtggaggttctg
agccggaggctgcgagacgagaggaagagacagaaaggaccactcggacacttcacagat
gcggaggaagtgtcgatccagaaggaggccaaggagctggggaaggtgatggacctgaac
atcgtgcgcttaaagttcactgcctacctgcaggacagcaacggagggttcacccgtggc
ctcaagcccgtcgtctccaactgcatctacgacagcaagtcgccaaacgcctccaacctg
aaaatctcccggatggataagacgtgtggctcggtgcttggaggagacgagatcttcctg
ctctgcgacaaagtccagaaagatgacatcgagatccgtttctacgaggaggacgacgag
ggaggctgggaggcgttcggagacttctcacctactgacgttcacaaacagtacgccatc
gtgtttaagactccgccctatcacagcgcagagatcgagcggcccgtcaccgtcttcctg
cagctgaagaggaagaaggccggagacagcagtgaccccaaacagttcacctacatacca
caggtccaagacaaagaggaggtgctgaggaagaagcagaagccgctgcctcattatgaa
ccctggagaggaggaggaggaggaggaagaggaggaggagctgggggatttggaggagga
ggagctggaggaggaggtttccagttcaaccagatgaatggaggaacaggaggaggagga
ggaggaggagttttcttcaccaccaactttaccggtttcggcggaggggctcagatgcca
ggctccggccctcacacggggacggacggacagacaacgggacagaccggctcaccgcta
caacagcagctgtttcagatcgccgccacgctccacagcagagcctcgcagagcgccaga
cacatggcggccgccctgctgcagtactgcagcaccggggacgcccgggtcctactggca
atccagagacacctctgtggagtccaggacgccaacggagacactcctttgcacctggcc
atcatccaccagcagtccggtgtgatccagcagctgatccacactctgctcagcagccgg
cagcacaacctcctcaacacagccaaccacctccaacaggtaacaatctccaacaggtag
DBGET
integrated database retrieval system
