Perca flavescens (yellow perch): 114572066
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Entry
114572066 CDS
T07494
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114572066 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114572066 (herc4)
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114572066 (herc4)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
HECT type E3
114572066 (herc4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
114572066
NCBI-ProteinID:
XP_028459292
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All DBs
Position
17:complement(10545006..10561199)
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AA seq
1068 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKQVCDVGCGHRHTAFLLEDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQIILAVSCGEAHTLALNDKGMVFSWGQGSDGQLGLNN
FEECVRVPRNIKSLSDVQIAQVACGYWHSHALSRGGQVFSWGQNRYGQLGLGINGQSIPT
PQIIQSLQGIPFAQISAGGAHSFALTLSGAVFGWGCNKFGQLGLNDSNDRSFPALLKSLR
SQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSANHEINPRKVFELMGNVVTQIA
CGRQHTIAFTPSREKMDSFGLGGNGQLGTRSTCNRKSPAPVKGPWVSCNSPTDTGHPNLL
FFPNIYLLPSLHNIADSEQGCFVKRIYAGGDQSFAHYCTANKLQNIDDVRIQDPYRRICT
LNEDIIHKWCNHSPGRLPQEISNEIDLVFSSASCLNGSFLSMSHPDHYSTSSKCSGVDMN
QARLLFHRLVQRDHPEIAQQIAASLEKNLIPRLSNSPPDIEALRLYLTLPECPLFSDRNN
YVTIAIPFAKSLLSLKEAPLKVLGNWWSTFEPRVFQRLVELYKGVVVYLLQMHKMGIPSV
EQRIFTCFLDTSLRLLEILHMVSERAGHIIQYDKFYIHELDDLIDIRNDYVTWIQRQMYP
MGPDGGVTLCRYPFVFDAQAKTTLLHTDAVIQMQMAVDQAQMQNFSSMFMPAVESVNPCL
ILIVRRENIVGDTMEVLRKSKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMKELLDPK
YGMFRYYEESRLIWFSNKTFEDIDLFNLIGIICGLAIYNLTIVELNFPVALYKKLLKRKP
TLDDLKELMPDVGRSLQQLLDYTEDDLEETFCLNFTITEENYGATEVLELVPNGEDINVN
QSNRQDFVNAYVDYVFNTSVAPLFECFYAGFHKVCGGKVLELFQPNELQAMVIGNTNYDW
TELEKSTEYKGEYWADHPTIRLFWEVFHNLPLEKKKQFLLFLTGSDRIPILGMKSLKLVI
QPTGGGEHYLPVAHTCFNLLDLPKYRSLETLREKLLQAIDHNQGFNLA
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggggtaatgcttcctacggacagttaggcctgggtgggattgacgaagag
attgtggttgagccacgaaaatgtgaattctttcatgggaagcaagtgtgcgatgtgggg
tgtggccacagacacacagccttcctgctggaggatgggacagtatacacctgtggctgc
aatgacctagggcagctgggacatgagaagtccagaaagaaaccagaacaggttgtggcc
ctggatgcacagatcatactggcggtgtcatgtggagaggcccatacgctcgccctgaat
gacaaagggatggttttctcatggggtcagggctcagatgggcagttaggccttaataac
tttgaagaatgtgttcgtgtgcctagaaacatcaagagtttgtcagatgtacaaattgct
caggtagcctgtggatattggcactcccatgcactttcaagagggggccaagtcttctct
tggggccagaatcgatatggacaacttgggctaggaataaacggacagagcattcccacg
ccccaaatcattcagtctctgcagggcattccttttgcccagatatcagcaggtggtgct
cacagctttgccctcactctctcaggagcagtgtttggttgggggtgcaataagtttggt
cagctgggtctcaatgacagcaatgatcggtctttcccagccctgctgaagtctctcaga
tcgcagagagtgatttacatctcctgtggagaagatcacacagcagcactgaccaaggaa
ggaggtgtgtttacatttggagcaggaggatacgggcaactcggacataactctgcaaac
catgagataaaccctaggaaagtgtttgagctcatgggaaatgtagtcacacagattgca
tgtggaaggcagcacacgattgctttcacaccctcccgtgagaagatggactcatttggg
ctcggtggtaacgggcagcttgggactcgctccacttgcaacagaaaaagccccgccccc
gtcaaaggcccctgggtttcctgcaattctccaacagatacaggtcatcccaacctcctc
ttctttccaaacatttatttattgccgtcattgcataacattgcagactcggagcagggc
tgttttgtcaagaggatttatgccggaggagaccagagctttgctcactattgcactgcc
aacaaactccagaacatagacgacgtgaggatacaagatccctacagaaggatctgcacc
ttgaatgaggatattatacacaagtggtgcaaccactccccaggaagactgccacaagaa
atctccaatgagattgacctcgtgttctcctcagcaagctgcctcaatggatcttttctg
tcaatgagtcatccagatcactacagtaccagcagtaaatgttcaggggtggatatgaac
caggctcgcctcctgtttcacagactggtccaacgagatcaccctgagatcgctcagcag
attgctgccagtctggagaagaacctaattcccagactaagcaactctcctccagacatt
gaagccctgagactctacctcactctcccagaatgccctctcttcagtgaccgaaataat
tacgtgaccatcgctatcccgtttgccaaatcactcctcagtctgaaagaggctccattg
aaggtgctagggaactggtggtctacgtttgagccccgagtcttccagcggctggttgag
ttgtacaagggagtggtggtgtatctgcttcagatgcacaagatgggcattccttcggta
gagcagagaattttcacctgtttcctggacacgtccctccgactcctggagatcctgcac
atggtgagtgagagagcaggacacatcattcagtacgataaattctacatccacgagttg
gatgacctgatagacatccgaaatgactacgtcacatggattcagaggcagatgtaccca
atgggtcctgatggtggggtgactctgtgcaggtatccctttgtgtttgacgcccaagca
aagaccacactgcttcacactgatgctgtcatacagatgcagatggcagtggaccaggca
cagatgcaaaacttcagctccatgttcatgccagcggtggaatccgtcaacccgtgcctc
atcctcatcgtccggagggaaaacattgttggagacaccatggaagtcctcaggaagtcc
aagaacgttgactacaagaaaccactcaaggtgatcttcgtgggagaagaggccgtcgat
gcaggaggtgtgagaaaggagttcttcctcctgatcatgaaagagctgctggatccaaaa
tatgggatgtttcgttactacgaggagtccaggcttatctggttttcaaacaagactttt
gaggacatcgacttgtttaacctgatcgggatcatctgtggcctggccatctacaacctc
actatagtggagctcaacttccctgtggccctttacaagaagctcctgaagaggaagccg
acactggatgacctgaaagagctaatgccagatgtgggaaggagtctgcagcagttactt
gactacacagaagatgacttggaggaaaccttctgcttgaacttcacaatcacagaggaa
aactatggtgccacagaggtcttggaactagtaccgaatggcgaagacatcaatgtcaat
cagtcaaacaggcaagacttcgtcaatgcatacgtggactacgttttcaacacatcagtg
gccccgctgtttgagtgcttctatgcaggcttccacaaggtgtgcggtgggaaggttcta
gagctgttccagccaaatgaactgcaagccatggtcattggtaacaccaactatgactgg
acggagctcgaaaagagcactgaatacaaaggggagtactgggcggaccatcccaccatc
aggctcttctgggaggtgttccacaatcttcctttagagaagaaaaaacagtttctcttg
ttcctcacaggaagtgaccgcatacccattttgggcatgaaaagcctgaagctggtgatc
cagccaaccggtggcggggagcattacttacctgtggcccacacctgcttcaacctgctg
gacctgcccaagtacaggagtctggaaaccctccgggagaagcttctacaggctatagat
cacaaccaaggctttaatctggcctga
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