Perca flavescens (yellow perch): 114572081
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Entry
114572081 CDS
T07494
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114572081 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pflv03009
]
114572081 (nvl)
Ribosome biogenesis [BR:
pflv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
114572081 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
AAA_33
NPHP3_N
TIP49
Mg_chelatase
RNA_helicase
AAA_28
AAA_17
AAA_18
nSTAND3
Vps4_C
ABC_tran
NACHT
TsaE
Rad17
Viral_helicase1
Zeta_toxin
IstB_IS21
ATPase
AAA_3
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
114572081
NCBI-ProteinID:
XP_028459317
LinkDB
All DBs
Position
17:4051685..4102262
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AA seq
869 aa
AA seq
DB search
MKNRSGGCLDSRLRQRVEQYLATCTSEYVDLSAMALELQKLYRMEYGRRNRTAFRIQVEK
VYEAIMKESGLNDLESKHLAKKAKHSHNDTGDGSSSSEESSDSDDPILENTARNNVKPTN
HMNSSLTSLYRKGHPESGTCSPRRDQPAASSPASTANLPPSAGTLVSTGGWFIDRGRGPE
KSSILIDLCEEEPMNTMSNQTDVSMLEPEKSAKKSKKRRKTSTETTESRSLNKKAKSKSP
ELQYPTLKFEDVGGNEETLTEVCKLLIHMRHPEVYQQLGMVPPRGFLLHGPPGCGKTLLA
QAVAGEMQLPMLKVSAPELVSGVSGESEQKLRELFDLAVSSSPCILFIDEIDAITPKREV
ASKDMERRIVAQLLTCMDDLNSLTETAQVLVIGATNRPDSLDPALRRAGRFDREICLGIP
DEAARLRILKTLCRKLKLPEDFDYQQLARLTPGYVGADLMALCREAAMSAVHRVLLEIRG
QSRSATEELLTSRDLAEAAVSDGEVRKQQTNDTEPVPEEESGQDPLQQGELWHLLHLLKS
TETLSEEELASLRILMSDFKASLVSIQPSAKREGFATVPDVTWEDVGALQDIREELTMAI
LAPVRSPEQFRALGLSAPSGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG
ESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSGHESGASVRVVNQLLTEMDGLETRRQ
VFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPADRHAILLTITKGGTKPQLEHNVCLE
EVAFDERCDCFSGADITALVREASVNALRIYLKSQPSPASSSGHTYSSGSVADIRVSKQN
FDDAFKKVRPSVSKKDQRMYEQLRESLSR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagaagtggtggctgtctggacagtcgtctcagacagagagtggagcagtat
ttggcgacatgcaccagtgaatatgtggacctttcagccatggccctggaacttcaaaaa
ctgtacagaatggagtatggcagaagaaacaggacagccttcaggattcaagtagagaaa
gtgtacgaagcaatcatgaaggagtctgggctgaatgatctggagagcaaacacttggct
aagaaagccaagcacagccacaatgacaccggggatggcagcagcagctcagaagagtcc
tctgacagtgatgaccccattctggagaacactgcaagaaataatgtaaagcccaccaac
cacatgaacagctctctgacatccttgtaccggaaaggccaccctgagtctggcacttgc
tcacccaggagagatcagcctgctgccagcagtcctgccagcacagccaacctccctccc
agtgcagggacgctggtctccacaggaggctggttcattgaccgaggcagaggccccgag
aagagcagcatcctcatcgacctgtgtgaagaggagccaatgaatacaatgtccaatcaa
acggatgtgtccatgctggaacctgagaaatctgccaaaaagtccaaaaaaaggaggaag
acctccactgaaactacggagtctcgcagcctgaataagaaagcaaagtcaaagtcacca
gagctgcagtatcccactttgaagtttgaagatgtaggaggtaatgaagagacgctaacg
gaggtgtgtaagctgctgatccacatgcgtcacccagaggtgtaccagcagctgggaatg
gttcctccgaggggcttcctgctccacggacctcctggctgtggaaagaccctgctggcc
caggctgtggctggggagatgcagctgcccatgttgaaggtgtctgctccggagctggtg
tctggagtttctggggagtctgaacagaagctccgagagctgtttgacctggctgtgagc
tcctccccatgtatcctgttcatagatgagatagacgccatcacaccgaagagagaagtg
gcttctaaagacatggagaggaggattgtagcccagctgctaacttgcatggacgacttg
aacagtctaacagagacggctcaggtcctggtcattggtgccaccaacaggccagactcc
ctggacccggccctccgccgagccgggcgcttcgacagagagatctgcctgggtattcct
gatgaagcagctcgtctcaggatcttgaagacattgtgtcgaaagctgaagctgccggag
gactttgactaccagcagctagcccggctcacccccggctacgtgggcgcagacctcatg
gctctgtgccgcgaagctgccatgagtgctgtccacagggttctgctggagataagagga
caaagccggagcgccactgaagagctgttaacaagcagagatctggctgaggctgctgtg
agcgacggagaggtccgaaaacaacagaccaacgacactgagccagtacctgaggaagag
tcaggacaggatcccctgcagcagggggagctctggcacctgctgcatttgctgaaaagc
actgagacactgtcggaggaagagctggccagcctgcgcatcctcatgtcagacttcaag
gcctctctggtcagtatccagccttcagccaagagagagggcttcgccaccgtgcccgat
gtcacctgggaggatgtgggagccctgcaggacatcagagaggagctcaccatggccata
ctggccccggtgcggtctccagagcagttcagagctctggggctcagtgctccatctggt
gtgctgctggctggacctccaggatgtggaaaaacactgctggccaaggcagtggccaat
gagtcaggcctcaacttcatctctgtcaagggtccagagctgctcaacatgtatgtggga
gagagtgagcgcgccgtcagacaggtctttcagagaggacgtaactcggctccttgtgtc
atattctttgatgagatcgatgctctgtgtcctcggcgctcaggccatgagtcaggagcc
agtgtgcgggtggtcaaccagctgctcacagagatggacggcttagagactcgacggcag
gtcttcatcatggctgcaaccaacagaccagatatcatcgaccctgccatcctgaggcca
ggtcgtctagataaaaccttgtatgtgggtctgccacctcctgcagaccgccatgccatc
ctgctcaccattactaagggagggaccaaacctcagctggagcacaatgtctgccttgaa
gaggtcgctttcgacgagcgctgtgattgcttcagtggtgcggacatcactgctttagtg
agggaagcatctgttaatgccctgaggatctacctgaagtcccagccttccccagcttct
tcctctggtcacacatattcctctggctctgtcgctgacatcagagtgagcaaacagaac
tttgatgatgccttcaagaaagttcgaccatctgtgtccaaaaaggaccagaggatgtac
gagcagctgagagagtccctcagcagataa
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