Perca flavescens (yellow perch): 114572258
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Entry
114572258 CDS
T07494
Symbol
nphp1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pflv03037
]
114572258 (nphp1)
Cilium and associated proteins [BR:
pflv03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
114572258 (nphp1)
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Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
hSH3
Sigma70_ner
BUD22
NOA36
Motif
Other DBs
NCBI-GeneID:
114572258
NCBI-ProteinID:
XP_028459593
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Position
17:25382855..25398907
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AA seq
687 aa
AA seq
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MPPKRKGRLQLVQKEVDEITKQVDSLVKDVQSQDGSTEEAFRRCQELQISAEKTLRTLNK
LTKADELAPVGNYDQRKQEEERRLLKILERVNTLSLELSPPGSSTAAGNVSKEDSEEKDN
DDEDEVDEDSSDDEADGADEDEKQAVKPPSQSDPHIYTVLSDFKGEQEGDLSVQRGDVLR
IIRKTIDGWWLAQDAKGNRGVVPKTYLKIGSGVDDDDEDEDDDDDNEEESEEEEEQIGKE
LTDDEEKQSSSLHSNWSTVRKSLTEIDATDVLSAMGAIPSGFRPSSLNKLLMEEGITYRG
SHYIQPELSQSQLSFSDLFLDPDTGRVRARQVRTCVCFSLWSCRMIPTPGVGVQVLSRHI
RLCAFDGTQVLSNIHTVRATYNSKTPKTWSFSPRMAGILPALLDGDCYLRCNSASPDLGI
LFELGVTFIRNSTGERGDLSCGWSFLKLTDDTGNPLPKRTYELPVNDGTPYEKDVVVEAS
VTRGSPAGVFQQILQARRQPRIIIKLKSSNSRTRTQLSLLPDTLLHCQSCIHLLALHRQL
LADTLLMDRPTMQNADLICSPVLSTFPMLLDQPDLMDALRSAWLDAETNMSRAQRRDLSY
LKQEFVKVYMSSVYFLLHSPSLPCHRWADPPLEEQRARVIYATLDALKRTQHTTGQSGGP
EVFVDPMHQHLAFDITELTFDLLRVSR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaaacgaaaaggacgtttgcagcttgtccagaaagaagtggacgaaatcaca
aaacaggttgacagtctggtgaaggatgtgcagagtcaggacggatctactgaagaggca
tttcggagatgtcaagaactgcagatttcggcagagaagacactaaggacactgaataaa
ctgaccaaggcagatgagctggctccagtggggaactatgatcagaggaagcaggaagag
gagagacgactgctgaagatcttggagcgtgtaaacacactctctctggagctttcacca
ccaggatccagtactgctgcgggaaatgtttcaaaggaagatagcgaggaaaaggacaat
gacgacgaagatgaagttgacgaagacagtagcgatgatgaagctgatggtgctgatgaa
gatgagaaacaagctgtgaaaccgccctctcagtcagaccctcacatctacacagtcctc
agtgatttcaaaggagaacaggagggagatctgtctgttcagaggggggatgtattgagg
attatcaggaagacaatagatggatggtggctggctcaagatgctaaaggcaacagggga
gtggttccaaaaacctacctgaagattggttctggtgttgatgatgatgatgaagatgag
gacgatgatgatgacaatgaggaggaatcagaggaggaggaagagcagattggcaaagaa
ctgactgatgatgaagagaaacagagcagttctctacattccaactggagtactgtcaga
aagtctttgactgagattgatgcaacagatgtgctctctgccatgggagctataccttca
ggattcagaccatcatctctcaacaaactgctgatggaggaaggtataacatacagagga
agtcactatattcagcctgagctcagccaatcacagctctcctttagtgacctcttcctg
gatccagatacaggcagggttcgggctcggcaggtcaggacttgtgtttgtttcagtttg
tggagctgcaggatgattcctactcctggggttggagttcaggtcctcagcagacacatc
cgcctgtgtgcctttgatggaactcaggtgttgagtaacatccacacagtgagggcaacg
tacaactccaagactccaaagacctggagcttctccccaaggatggcgggtatcctgccc
gccctcctagatggagactgttatctgcgctgcaactctgcatctcctgacctcggtatc
ctctttgaactgggagtcacctttatacgcaattctacaggtgagagaggggaccttagc
tgtggctggtctttcctcaaactgaccgatgacactggaaatccactccccaagaggacc
tatgagctgccagtcaatgatggcactccttatgagaaggatgtcgtggtggaggcatca
gtcaccagaggatctccagctggtgttttccagcagatacttcaggccaggcggcagccc
agaatcattataaagttgaaatcatccaacagccggacaagaacgcagctcagtctcctt
ccagacactttgctgcactgtcagagctgcatccacctgctcgctctacacaggcagctg
ctagctgacacactactgatggacaggcctaccatgcagaacgcagatctgatatgcagt
cctgtactttctacctttcctatgctgttggaccaaccagacctgatggatgctctcagg
agtgcctggctggatgctgagaccaacatgagcagagcacagaggagagacttgtcctat
ttaaaacaggagtttgtcaaagtctacatgtcgtctgtctatttcctccttcactcgccc
tcgctgccctgtcatcgctgggcggacccacccttagaggagcagcgtgccagagtcatc
tacgccaccctggatgctctcaaacgcacccagcacaccaccggccaatcaggaggccca
gaggtctttgtcgaccccatgcatcagcatcttgcctttgatatcacagagttgaccttt
gacctcctccgtgtgtcacggtaa
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