Perca flavescens (yellow perch): 114572432
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Entry
114572432 CDS
T07494
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pflv03016
]
114572432 (tarbp1)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114572432 (tarbp1)
Enzymes [BR:
pflv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
114572432 (tarbp1)
Transfer RNA biogenesis [BR:
pflv03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
114572432 (tarbp1)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114572432 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
114572432
NCBI-ProteinID:
XP_028459868
LinkDB
All DBs
Position
17:complement(15231419..15245230)
Genome browser
AA seq
1637 aa
AA seq
DB search
MYSVLINAVLSSSPDYELLFESLTWPSDSWPGTERVEALTAFIEGLGPLLADSDTTLFSA
AKRKCITDKIDSVIWTQSLPLLSKISAEAGEAMRCRESTAAACRLVSVCVPLCDEAVPGR
VARSVLPSLQLSEEEGPAPGRLSVEVASEVMAALLPSLDEQLTLTTLSAALSCIKTLPDA
LVSKITVRLLLTVLNCCSGARSTSILKLVLDDLCIWHSTDRTPVVTERALLCLTALSDHM
LKPHSLPFSSSSSSSSCEPDPRLSLQFWRMVQDGLTHRDSVSRKRALYLLKMCVALSEEE
GVDCPLSSSGEDDILFKWASNRSKLLREFWEDYALVMETLEENQIHVVRPVLNRIDTLIQ
TTVNDSQASDQGLFHPSWLLCVYQRMFHSENKSLMREGVCHLLELRVLQQPAFALAFSEF
IVGPFMDVLSETSLFHKSVGQSVGDCPELGAKLQVFMTTFFSSLPSEHRGRMLLQMIQQL
CSKHWCAAPLLFLTQALSKLPPNPLLGIDGLTALREVLCCTMITHQVLLRGAAQCFLLNS
VLCLTEVSTVTLDDVFSFLVHFRADESLCRGTQIWNQLCVWLLDNEGRFKSRIMDGDCTG
AAIKEETVRGYVQSEIHAYLRVPASTGHTERLPDSREADKLARAILLCVDMERNQLGAEI
DNSLESLLSLLLDTLSRVSTNIYLPLRKSDKSLQLVLRLFQLGGTPSCQHGGEEQVNTVM
VATERLIFKVVDPIQEFILRQLLGELQELFDVERAELYLCVLRQLVVTYSSTPQHHAQIQ
QTYFPKLIRHSLKVLQEPSQQIHSVANQVARAVAMASLATVCGLVEQKGIDMQSETISVL
KSVNDYFYNPVSSSSQSQSSLGNFNKCLQKPQTGDSSCDVGVQGRLLQDWGRIAASFMRD
QWICLSSLIKAVGIPESVESSIVPETLKAALSCSVEALALLPSDLVLPVLTFMESVLPQL
LLHEEALCAEAVTLSWELVRGLSTNAHDFWPSLKGFISMAFHRKLLELTDSSAPTLLATL
KLIATELMELSQSKSGVFGVLLPHCCQTWLPTDRGSGDGIFSSVFSHINILTEACVYGPV
FRRDQRLIQDVQTYVEQLGEECAANVAVTSDNRDDQLPRTCVLAFLSRLDPSNLQHERLI
EELVMDLLKKDNDISKSKVRYYSNSLQHRVKNRVWQTLLLLLPKIREEFVATVLNCVFEA
GFCSNHASVKYLIEWMMILILIHYPQHMDSFWACFNRDHEKTKTSICTFLSVLVHFNVIV
PNLKDKDVHLRKALDIILQWCFNHNFSVRLYALLALKRVWSLAGVRAEEGAEGFGGLSTV
IKACLNQAEAMQNTGNANKNWTRIQEHFFFGAFHPIRDYSAETIFYTFPSLSELADEEWI
PPSKFEKLLCFSESPSFPLRNPAPDLSQLQPGDWIQQDKGEQNKEERWAEVQKKITPWRL
GIQEQEPELQLVPQQRAARLGKQHGALLVVASLIDKPTNLGGLCRTCEIFGASTLVLDSL
RHVSDKHFQSLSVSSELWIPLLEVKPMELADFLQVKKSEGYCIVGVEQTANSQSLQDYQF
PEKTLLLLGNEREGIPANLLQMFDVCVEIPQQGVTRSLNVHVSAALLIWEYTRQHLTSGS
RSTQNLKTEEGTSSAAL
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgtattccgttttaattaacgcggtcttgtccagctctcctgactacgagcttttgttt
gagtctctaacctggccgagtgactcatggccggggacggagcgagtggaggcgctgaca
gctttcattgaaggactcggaccacttttggctgactcggacacgactctgttttcagct
gcgaaaagaaaatgtattacagataaaatcgactcggtgatttggacccagtctctacct
cttctctccaaaatatcagctgaagccggtgaagccatgcggtgcagggagagtaccgcc
gctgcctgcagacttgtgagtgtctgtgtcccgctatgtgacgaggctgtgccgggccga
gtagcacggtctgtcctgccgtcgctccagctgtcagaggaggaggggcctgccccggga
cgactcagtgtggaggttgctagtgaagtcatggctgctcttctaccgtctctggatgaa
cagctcacacttaccaccctgtcagctgccttgtcctgcatcaaaacactccctgatgca
ttggtctctaaaatcacagtcaggcttctcttaactgtcctgaactgctgcagcggtgcg
aggtcaacgagcatcctcaagttggtcctggatgatctgtgcatctggcactccactgac
cgcacacctgtggtcacagagcgggcactgttgtgtttgaccgccctgtcagaccacatg
ctgaaacctcacagcctccctttctcttcttcttcctcctcctcctcctgtgagcccgac
cctcgtctgtccctccagttctggaggatggttcaggatggactgacgcacagagacagc
gtgtctcgtaaaagggcgttgtacctgctgaaaatgtgcgtggccctatcagaggaggaa
ggggtggactgtcctctctcttcatcaggagaagatgacatcttgttcaaatgggcctct
aacaggagcaagttacttagagagttctgggaggattatgcgctggtgatggagaccctg
gaggaaaaccagattcatgtcgtccggccagttctaaaccgaatagacacgttgatccaa
acaacagtgaatgacagtcaagcttcagatcaaggcttgttccacccctcctggctgctg
tgtgtgtaccagcggatgttccacagtgagaataaatccttgatgagagagggagtgtgt
catctactcgagctgcgtgtcctccagcagccagcctttgctttggccttttctgagttc
atcgttggcccttttatggatgttctgtctgaaacgtcgctcttccacaagtcagttggg
cagagtgtaggcgattgtcctgagctcggggctaaactccaagtcttcatgaccaccttc
ttcagcagcctgccatcagagcacagaggccgtatgttgctgcagatgattcagcagctg
tgctctaagcactggtgtgcggcaccccttctcttcctcacccaggctctatccaaactc
cccccgaaccctctgctggggatcgatgggctcactgctctcagggaggtgctgtgctgc
accatgatcactcatcaagtcctgctgagaggcgctgctcagtgcttcctgttaaatagt
gtcctctgtctcacagaagtgagcacagtgaccctcgatgatgtttttagtttcctggtg
cattttcgtgcagatgagtcactgtgtagagggacgcagatttggaatcagttgtgtgtc
tggctgttggacaatgaaggccgtttcaagtccaggattatggatggagattgcactggt
gctgccataaaggaagaaactgtaagaggctatgttcaaagcgagattcacgcctatctc
cgagtcccagctagcacaggtcacactgagaggttgcctgactccagagaagccgacaag
ttggccagggccattctgctgtgtgtggacatggagaggaatcaactcggggcagagatc
gataactctctggagtcgttactgtcgctgctgctggacaccctgagccgagtcagcacc
aatatctacttgcctctgcgtaagagcgacaagagcctgcagctcgtgctccgactgttc
cagcttggaggaacaccaagctgccagcatggtggagaggagcaagtgaacaccgtgatg
gttgccacggagaggctaatttttaaagttgttgatccaatccaggagtttatcttgagg
cagctacttggggagctgcaagagctgttcgatgtggagcgggcagagctgtatctgtgt
gtcctgcgacagctggtggtcacatacagttctacaccacagcaccacgctcaaattcag
cagacctatttccctaaactcataaggcacagcctcaaggtcctgcaagaaccaagccag
cagatccactctgtggcaaaccaggtggctagagcggttgctatggcatccctggctacg
gtatgtggtctcgtggagcagaaagggattgacatgcaatcagagaccatttccgttctg
aaatcagtgaatgactacttctacaatccagtgtcatcttcctcccaaagtcagtcctct
ctgggaaacttcaataagtgcctgcaaaaaccacagacaggagacagttcatgtgatgta
ggagtgcagggtcgtctgctgcaggactggggacgcatcgctgccagttttatgcgggac
cagtggatttgtctgagctccttgattaaggctgttgggataccggagtctgtcgagagt
tccatagtgcctgagactctcaaggctgctctgagctgcagtgtggaggccctggctctg
ctgcccagtgacctggtgctgcccgtgctcacctttatggagagcgtgctgccacaatta
ctacttcatgaggaggccctgtgtgccgaggctgtgactctgagctgggagctggtgcgg
gggctgagcacgaacgcccatgacttctggccgtccctgaaaggcttcatctccatggcc
ttccaccgtaaactgctggagctgacagatagttctgctccaacacttctggccaccttg
aaactgattgccactgagctgatggagctgtctcagtccaagagtggagtgttcggcgtg
ctgcttccacactgctgtcagacatggctgcccacagaccgaggcagcggtgacggcata
ttttctagtgttttcagccacatcaacatactcactgaggcttgtgtctacggaccagtg
ttcaggagagatcagcggctcatccaggatgtccaaacatatgtggagcaacttggtgaa
gagtgtgctgccaatgttgcagttacaagtgataaccgggatgaccagttgccccgcaca
tgtgtactggcctttcttagccgcctggatccctctaatctgcagcatgaaagactaata
gaggaactagttatggatttgttgaaaaaggataatgacatatcaaagtcaaaagtgcgt
tactatagcaactccctgcagcatcgtgtcaaaaacagagtatggcaaacactgctgctg
ttgctgcccaaaatcagagaggagtttgtcgccacggtgcttaactgtgtgtttgaagct
ggattctgcagtaaccatgcctcagtcaaatacctgatcgagtggatgatgattctgatc
ctcatacactatccacaacacatggacagcttttgggcctgcttcaacagggatcacgaa
aagaccaagacaagcatctgcaccttcctgtcagtcctggtacatttcaatgtcatcgtt
cctaatcttaaggataaggatgtgcatttgcgtaaagcgctggacatcatcctgcagtgg
tgtttcaaccataacttcagcgtgcgcctgtatgcattactggccctgaagagggtgtgg
agcttggctggggtccgggcagaggaaggggccgagggtttcggagggctttccactgtg
atcaaggcctgcctgaaccaggctgaggccatgcagaacaccggaaatgccaacaagaac
tggacgaggattcaggagcacttcttttttggcgcctttcatcctatcagggattacagt
gctgagaccatattctatacgttccccagtctgtcagagttggctgatgaggaatggatt
ccaccctcgaagtttgagaaacttttgtgtttctctgaaagtccatcttttcctttgaga
aatcctgctcctgacctgagtcaactccagcctggagactggattcagcaagacaaaggc
gagcagaataaagaggagcgctgggccgaggtgcagaagaagatcactccctggaggttg
gggatccaggagcaggagcctgaacttcagcttgttccacaacagagggctgctcggctg
ggcaaacagcatggtgccctgctggtggtagcctcacttatagacaagcccaccaatcta
ggaggtctgtgcaggacctgtgagatctttggtgccagcactctggttctggatagcctt
cgccacgtcagtgacaaacactttcagtccctgagtgtctcgtctgagctctggattcct
ctgttagaggtgaagccaatggagctcgctgacttcctgcaggtaaagaagagtgaaggg
tactgtattgttggagtggagcagacggccaacagtcagagcctccaggactaccagttc
cctgagaagaccctgctactgctgggcaacgaacgagaaggtatccctgccaatttactc
cagatgtttgatgtgtgtgtggagatccctcaacaaggggtcacccgttcactaaacgtg
cacgtaagcgctgccctgctgatttgggaatatacacggcaacatctcacctctggctca
aggtcaactcaaaacctgaaaactgaagaaggaaccagcagtgcagccctatga
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integrated database retrieval system
