Perca flavescens (yellow perch): 114572567
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Entry
114572567 CDS
T07494
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflv03041
]
114572567
Enzymes [BR:
pflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114572567
Spliceosome [BR:
pflv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114572567
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
114572567
NCBI-ProteinID:
XP_028460046
LinkDB
All DBs
Position
17:21377565..21387850
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AA seq
719 aa
AA seq
DB search
LDSRKYHRVSKERGLTSHLGATLLKGALLPSLRFYKLLSERKELPVWKAKCEFMDTLAKG
RFVIVSGSAKTGRSSQIPQWCAEFCLSVQFQHGMVVCTQIHSQQAVDLALRVADEMDVNI
GHEVGYSIPLETCSTNDTVLRYCTDDMLLREMMSDPLLERYGVVIVDQAHQRTVATDVLQ
GLLKDIALQRPELRVVLLTAVEPVPKQLAHFTGSAAPLIGLESPGAGEVVHSSTGDSYFC
SALRLVLEIHRSEEEGDVVVFLVTAQEIDLAHEILCHEGHSLSPDRGELLPVAVHPGQPG
NLPILGEEETGRPRRVFLTSSPNEDFFWAVSSIRFVIDAGLEKRYVYNPRIRTNSVIIQP
ISAGQAKSRNQLAGPTGKCFCLYPEDRQLPIEIRPHVVESDISSTVLFLKRMEIAGLGHC
DFIDRPDPEGLMQALEELDYLAALDNDGNLSEMGIIMSEFPLEPQMAKTLLASCEFDCVS
EVVIIAAMLTVPTCFMVPSAELKPEATQCHMKFQNPEGDHFTLINIYKAFKQCQQDPYCN
VEKWCQDFYLNHAALLMADVLRTELTDTLKRIELPISVPAFGSRSNTLNIKKALLAGFFM
QVARDVDGSGNYFILTHRHVAQIHPLSGYGAKSPKLGLPEWVLFHEHSFSEDNCLRTATH
ITPEEFIQMAPQYFFYNLPPSESKDILQNILNHGASQYQDRKPPTSQEEPQTSDRCVIQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ttggacagtcggaagtatcacagagtttccaaagaaagggggctaacatcacacctcggt
gctacgcttctaaaaggtgctttgttgccctcgctcaggttttacaaattgctgagtgaa
aggaaagaactgccagtgtggaaagcaaaatgtgaattcatggacactttggccaaagga
cggtttgtcattgtcagtggctctgccaaaactgggagaagttctcaaattccccagtgg
tgtgctgaattctgcctgtcagtccagttccagcatggcatggtggtttgtacccagatt
cactcacagcaggcagtagatctcgccttaagagtggctgatgagatggatgtcaacatc
ggtcatgaggtcgggtacagcatccctttggaaacatgttctactaacgacacagtcctc
aggtactgcacagatgacatgctcctgagagagatgatgtcagaccctttgcttgagcgc
tacggtgtggtcatcgtggaccaggcccaccagaggaccgtagccaccgatgtactccag
ggtctgctgaaggacatcgccctgcagagaccagagctccgtgtggtcctccttacagcc
gtcgaacccgtccccaagcagctggcccactttaccgggtcagcagcgcctctgattggc
ctggagagcccgggtgcgggggaggtggtgcacagcagcacaggtgacagctacttctgc
tctgctctccgtctggtgctggagatccaccgctctgaagaggaaggagatgtggttgtg
tttctggtgacggcgcaggagatagatctggcccatgagatcctgtgtcatgagggacac
agtttatcccctgatcggggtgagctcctgcccgttgctgtgcaccctggccagcctggg
aatctaccaatcctgggggaggaggagacaggccggccccgcagagtattcctcacatcc
agcccaaacgaggacttcttctgggctgttagctcaatacgttttgtcattgatgccggg
cttgagaaaagatatgtttacaaccccaggatcagaacaaactcagtcatcattcagcca
atcagcgcgggtcaagccaagagtcgcaatcagctggcaggtccaacaggcaagtgtttt
tgtctgtacccagaagacagacagcttcctatcgagatacgcccacatgttgtggagtct
gacatctcttccactgtgctcttcttgaagaggatggagatcgctggactgggccactgt
gacttcatcgacaggccagatcctgaaggcctaatgcaggctttggaggagctagactac
cttgcagctctggataatgatggcaacctgtctgagatgggcatcatcatgtcggaattc
cctttggagccccaaatggccaaaactctgctcgcctcctgtgagtttgactgtgtcagc
gaggtggtcatcatcgctgccatgctaacagtaccgacttgcttcatggttccctctgcg
gaactgaagccagaggcgactcagtgccacatgaagttccagaacccagagggagaccac
ttcacccttatcaatatctacaaggccttcaaacagtgccagcaggatccatactgtaat
gtggagaaatggtgtcaggatttctacctgaaccacgctgctctgctgatggctgacgtt
cttcgtactgagctcaccgacaccctgaagaggatcgagctgcccatctcagtgccggcc
tttggttcccgaagcaacaccctcaacattaaaaaagctctgctggcaggttttttcatg
caggtggcacgggatgtggatggatcggggaactacttcattctgacccacaggcatgtg
gcacagatccatcctctgtctggctatggagccaagagccccaagctgggcctgcctgag
tgggtgctgttccacgagcactccttctctgaggacaactgcctccgcaccgcgacccac
ataacaccggaggagttcattcagatggcaccacagtattttttctacaatctaccgcct
agtgagagcaaagatatcctccaaaacattttgaaccatggagcttctcagtaccaagat
cggaaacctccaacctcccaagaggaaccccagacttcagaccgctgtgtcatacaatga
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