Perca flavescens (yellow perch): 114572795
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Entry
114572795 CDS
T07494
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114572795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114572795
03021 Transcription machinery [BR:
pflv03021
]
114572795
03036 Chromosome and associated proteins [BR:
pflv03036
]
114572795
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Helix-turn-helix
ARID
114572795
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114572795
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114572795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
114572795
NCBI-ProteinID:
XP_028460363
LinkDB
All DBs
Position
18:complement(32104602..32163856)
Genome browser
AA seq
1842 aa
AA seq
DB search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NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggtccacaactcccacgaaggcttcaacaacaacaacaacagtccgtataat
aaccactacccgaactacagacccggctatgggaatggtggatacgcgggaataatgagt
ccctcgcgccgggggaataacccgatgggcccgggcactaaagcggctatgattgctacc
agctccccggccggtatcggagggtatcagcagcggttccccgggcaacagtgtccgcag
caacagcaccagcacccctccggagctacgccgactttaaaccagttattgacgtctccc
agcccgatgatgcgaggttatggaagtggatatcccgattataacgttaattcttcacag
caacaacagcagctaacgttagctaaggacatccagtacggctcggctactcacggctgg
ggggcacaacaaagaagtcacccggccatgagccagggaaacaacggccagggcagcggc
agacttcaggtggcggcgatggacccgacggggatgaagtgctcgcagctctacggcatg
agcaaccacccgtacgcccagcagcagggggcgctatactccggccagccctacggtgct
ccctccccccacagatacccgatgggaatgcccagcagggggcagatggggatgggaggg
atgcagtaccctcagcagcagatgggttctcagtacagccagcagcagcagagcatgggt
ggttacggtcagccaggtcagcctccgtacttcagccctccacagcagcagcctgccgcc
ccgagccagccaccgtacatgcagccacgcccgctgccacaacaggaggtgcctcaggag
gcgtatggggggcgcggccagtctgctgctatgactcctgggaaaccgaaccacgaggag
atgagtctgagccaacaggagaggccgtccagcctgccggatttatccggctccatcgat
gacttgcccacgggcaccgaggcagcggtgagttcaggggcgtcgggctccggcagcgct
cagggcgaccaggggaccccggcccgttctcctttcnntccccacgtctcccctcgcctc
ccccccccagctcgctcggggccctccccttccccctcgctgtcccccgccggctccagc
agccaatcacggtccggacccatgtcccccgccgccagcgggccaggtttccctccctcc
atgcagcgaagcactttgtggcatcagtttgacccccagcagtcggcaccacccatgtcc
cctcacacagcaccaggggggcccatgcaccacggctcctaccagcagggggcctcctac
ggccagtatggtcccccaggtaactaccctcgccccccccactatggcggggcccccagt
gccaactacagcggcccgggccccggcttagccaacagcctgggtttgaacgccagtagt
cccatgcacggccagggcccgtccactccggcaggtcgtggccctgggcccggagccggg
ggccggccgtaccccgccggaggaagcaccatggcccctacttcccccggcatgccacag
cctgccgggcagggcatgggacccccggggcccaacgccagcagcaaaccgcctgaagtc
ggccccaacgccgggcctagtgccaactccaacaccgctcagagcaggcagggcagctac
ctgggcatggccccgatgggaggaatgggaggaggcccgtacagccagcaaacaggcagc
aactctgggaggatgactccgcagggacccccttacaacgctacaacctcaggcgccatg
atgatgatgatgccagcagacgggacaggagatggcgagctcggctacgaaccgcccaaa
gccaagccccccgtgtcccccagcctgtcctcgtgtcccggtgaagacgccggtagcagc
tccgcctgggccaagacgacaaccagctcccagaagcagaacgttgccacggtgaccagc
gagaagatcgcgcgtctgtacgagatgggcggcgagcccgacaggaagttgtgggtcgac
cgcttcctgtccttcatggaggagcgcggcacgcccgtccctaacctgcccaccgtcggg
aggaagcctctggacctctgcagactctacctggccgtccgggagatcggaggcctcgcc
atggtgaataagaacaagaagtggagggagttgtcgtctctgttgagcgtgggcacctcc
agcagctcggccagctccctgaagaagcagtacatccagtacctgttcgcctacgagtgt
aaggtagagcgaggggaggagcctccgcctgaggcgcccggctgcaccagagacaccaag
aaacccccgtcactgcaggccaaggtccagccgccctccccagccaactcgggctcccta
cagggccccaacacccctcagtccgaggcccccggaaacctgaagcccccgcacagccac
gtgggcccccagccctccaccccacacagccacatgggcccccatcctgcaaacaggaac
atggccggggtgagcatcctggacccgttctctgaaggcagcgatccagccttccacaac
aagcgaggcccgggaccccgcggcgcccccttccagcagggagggggccccgcagacccc
tcaatgaggatgcagtacgaggccaacaaagacccgtatggaggacccaggaaaggtccg
gtgcccggcgaggcctttggtccgggtcagatgcccagcggtgccatgcaggaagtgtac
ccccacgggccgccctctgggcccctaacagggatggaccccagaccccagtaccccttc
ggccccggatacgagcggaggccggaccacgtgccggggccggacgggggcgtggcgccc
cccggaggtcagagcggcgtggcgccgtctggtggcgaggccggcatgtacccggccaac
agatacacgcagcggagacacgatggctacgggcagcagtatcctcacagcctggcctac
acttcccatcagccactgctccctccgcagcagggatacaagcgtgcgatggagggcgtt
taccccccggcaaagcgccatgaggccgagcccttcacggcgcagcagttcggctcccac
ccccccgacgtgttcggcccgtacggcggcagcggtgggggctacgtgggccccgagcag
cgcccggtgcagggccagtacccgtatccatacgcccgggagcggcagcacggcatgatg
ggccccggggaggggccgcagcccaacatgtggccccccaggactgactacgcatacggc
cggcagggccaggggtaccccagcgtgacccgaggagacgagcaggacagccagtggccc
cccgggcatcccggccaacgacagcccccgtacccccactctgcctccccctccatgccc
cccatgccttccagacagcccccccccacctccttccaggccacgcccactgccccaaac
catgtgagccgctctcacagcccctgctcgttcccccggcccccgggcggctccctgtcc
cccaacagcgctccctaccccccatccgtgaagaagccggggcccacggcccctcagggg
ccccccctcatccacggagaggtcagcagcttcccaccggactctgtggaggccaccgtt
cccaaactgaagccacgacgcaggctaactgccaaggacacaggaaccccggaggcgtgg
cgggtgatgatgtcactgaagtccggcctgttagcggagagcacctgggctctggacacc
atcaacatcctgctgtacgacgacagcaccatgggttcctttaacctgtcgcagcttcct
ggtttcctggagctgatcgtggagtatttccggcgctgcctcatccagatctttggcatc
ctggtagagtacgaggtgggagccgagggccagaggacactgcccgaccccctcaaggaa
aaggaggaggaggaggaggaagaagaagcgaaggagaagccatctgacggccaatcagcc
gaggctcagaggacaccaaagacggaggagggaacgctcgcagcttcagccgacgttgag
aaagcggaagctgttgtaaaagaggaagtgaaggaggagcaggtggagatccgcccccaa
caggccagcaagttcgacaagctgccaatcacggtggaggaggagggggaggagtgggag
gagctggagaggcgctgggccgagctaagccaatcaaacggcttcatcagcggcctcttg
cactggaaagctgggggaggagacaccactgctcacatccagacgggggagtccactgct
cacatcctgacgggggagtccactgctcacatccacacgggggagtccactgctcacctc
cacacgggggagtccactgctcacctccacacgggggagtccactgctcacattcagacg
ggggagtccactgctcacattcagacgggggagtccacaatgaagaggagaggggaagta
gacgaggcgacaacacctgaaacgcaaaaaggcttcctgtgggaggggaggggacccagc
cccctcagcgagctggaggacgagcctctctgctgggacgagtgtcccctgtccctggcc
gagtcgtggcaggactctgtgtccagacgctgcctgtgcgtctccaacatcctgcgcggc
ctctccttcgtccccggcaacgacggcgagatgtcgcggcacgctggcctggtgctgatc
ctcggccgactggtgctgctgcaccacacacacacacccaggaaacgaacgtcgccgagc
ttccgtcggccagaggaagctgctggtgtggcgtgcagccgggacgggtggcgccgggac
tgcctggcggcgctgcgcgaggacacactggtgacgctggccaacgtggcgggccagcta
gacctgtctctgtaccccgagagcatctgcctgccgctgctggacgggctgctccactgg
acggtctgcccgtccgccgaggcccacgacccgctcgccgcctcggcgctgtcgccgcgc
cgactggcgctggagtgcctctgcaagctgagcatccaggacggcaacgtggacctgctg
ctcgccacgccgcctttcagccgccagcgaacgctgttcgccgcgctgctccgcctcgtg
ggcgaacgccgcagccaggtgtgtcgggaaatggcggtcgcggttctgtccaacctggct
caaggcgaagccgcggcggcgcgcgccgtggcgttgcagaagggcagcgtgggaacgctg
atcggcttcctggaggacgccgtggccgccgccgccacggggcagttccagcacgttggc
gagccagccagcgtcaacatgatgtgccgcgccgccaaggcgctgctggccgtggcgagg
acggaggacggccggacgcagttcgtgctgcacgagagccggctgctggacgtctcgctg
gcgcccgcgctcgacgcgtcggtggcggccatcttgtgcgaagtactgtttaaaatcggg
cgctcgtga
DBGET
integrated database retrieval system
