Perca flavescens (yellow perch): 114573031
Help
Entry
114573031 CDS
T07494
Name
(RefSeq) calpain-3-like isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114573031
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pflv01002
]
114573031
Enzymes [BR:
pflv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
114573031
Peptidases and inhibitors [BR:
pflv01002
]
Cysteine peptidases
Family C2: calpain family
114573031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
114573031
NCBI-ProteinID:
XP_028460713
LinkDB
All DBs
Position
18:complement(21376866..21392081)
Genome browser
AA seq
768 aa
AA seq
DB search
MGDKKYKVPLVEDTKVRVLYETEAFGPVDKADYPPAGTNSIYSAILSRNETVKDAKRLKT
FLELRDKYVTKKVVFEDPLFPADDSSLFYSHKPSMKIEWKRPSEICENPQFIIDGANRTD
ICQGELGDCWLLAAIACLTVNEKLLYRVIPPDQSFTDNYAGIFHFQFWRYGEWIDVVVDD
RIPTCKNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGLTEFFE
LSEAPKDLYNIMRKALERGSLMGCSIDILSATDVETRTEQGLVRGHAYSIIGLAECDEVA
KDTRIRLIRLRNPWGWVLWKGPWSANSKEWSTISTADKDNLKKQTVEESEFWMSFDDFQR
NFTKLEMCNLTPDTLQGDERHSWTVSVNEGRWVRGSSAGGCRNFPHTFWTNPQYRLKLYE
EDDDPEDGQATCTVVVALMQKGRRMQRHQGAKFLTIGFSIYEVPKEMCGQDQHLQKDFFL
YTASKAKCKTYINLREVTERFQLPPGEYVIIPTTFEAHQEGEFILRVFSEKQNMSEEAEN
TIGSDQTQQDKKKKEKPIVFVSDRARANKEIEHDGIQGEKRKKPKKKLLQPEEETEEEKQ
FRAIYKQIAGEDMQICANELKMIMKNVLAKHNEIKTEGFSLETCRSMIALMDTDGTGKLN
LQEFKHLWKKIKEWQRIFKRYDKDKSSSISSFEMRNAVNDAGFQLNRQLYDIIAMRYADE
HLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaagaaatataaagtgcctcttgttgaggatacaaaggtgagggtgctttat
gaaactgaagcatttgggcccgttgacaaagctgattaccctcctgctgggactaactcc
atctactctgcgattctaagcagaaacgagactgtcaaggatgccaagcgtcttaagact
tttttggaattgcgagacaaatatgtaacaaagaaggtggtgtttgaagaccccctgttc
cctgcagatgactcctcactcttctacagtcacaaaccgtccatgaagattgagtggaaa
cgtccctcggaaatttgtgaaaacccccagttcatcatagatggagccaacaggacagac
atctgtcagggagaactgggtgactgctggctgctggctgccatcgcgtgtctgacagtg
aacgagaagctgctgtacagagtgattccaccggaccagagcttcactgacaactatgca
ggcatcttccatttccagttctggcgttatggcgaatggattgatgtggttgtggacgac
cgcatccccacctgcaagaaccagctggttttcaccaaatctttcagaaagaacgagttc
tggagtgctcttttggaaaaggcttatgccaagttgcacgggtcttatgaggcacttaaa
gggggcaacactttggaagccatggaggatttcacaggaggacttaccgaattctttgag
ttgtccgaggcgcccaaagacctctataacatcatgaggaaggcgctggagagaggctcg
ctaatgggctgctccatagatattctttcagccactgatgtggagactcggactgaacag
gggctggtcaggggtcatgcctactccatcataggtctggcagagtgtgacgaggttgca
aaggacacccgaattcgcctgattcgcctgcgaaatccctggggttgggtgctgtggaag
ggaccatggagtgcaaattcaaaggaatggtcgaccatttccacagcagacaaggacaac
ctaaaaaaacagactgtagaggagagtgagttctggatgtcttttgatgatttccagagg
aacttcacaaagttggagatgtgtaacttgacccccgacaccctgcagggtgatgaaagg
cacagttggacagtgtcggtcaatgagggtcgctgggtgagaggcagctctgctggcggc
tgcaggaacttcccacacacattctggacgaacccacagtatcggctgaaactgtacgag
gaggatgacgacccagaggacgggcaggcgacctgcactgttgttgtggctctgatgcag
aaagggcgaaggatgcagcgccatcaaggggccaaattcctcaccatcggattttcgatc
tacgaggtgccgaaggagatgtgcggacaggatcaacacctgcagaaggacttcttcctg
tacacagcctccaaagctaaatgcaagacctacattaacctgcgggaggtgacggagcgt
ttccagctgcctccaggagagtacgtcatcatcccaacgacctttgaagcccatcaagag
ggagagttcattctcagggtcttctctgagaagcagaacatgtctgaggaggcggagaac
acgatcggatctgaccaaacgcagcaagacaagaaaaagaaagaaaagcctattgtattt
gtgtcagacagagcacgggccaacaaagaaatcgagcatgacggcattcagggggaaaag
aggaaaaaaccaaagaaaaaactactccaacctgaggaggagactgaagaggaaaaacag
ttcagagccatttacaaacagattgctggtgaggacatgcagatctgtgccaacgaactc
aagatgatcatgaagaatgtacttgccaaacataatgaaataaagacagagggtttcagc
cttgagacatgtcgtagtatgatcgccttgatggatactgatgggacaggaaagctgaac
ctacaggagttcaaacacttgtggaaaaagataaaggagtggcagcggatcttcaaacga
tacgataaagacaaatccagctccatcagtagttttgagatgaggaacgctgttaatgat
gcagggtttcaactcaaccgacagctgtatgacatcatagccatgcgctacgcagacgaa
cacctaaacatcgattttgacagttatatctgctgttttgtgagactagagggcatgttc
agagcttttaatgcctttgacaaagatggagatggaataatcaagctcaatgtcctggag
tggcttcagctgaccatgtattcttaa
DBGET
integrated database retrieval system
