Perca flavescens (yellow perch): 114573124
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Entry
114573124 CDS
T07494
Symbol
rev3l
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
114573124 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114573124 (rev3l)
Enzymes [BR:
pflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114573124 (rev3l)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
114573124 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
VWC
Motif
Other DBs
NCBI-GeneID:
114573124
NCBI-ProteinID:
XP_028460868
LinkDB
All DBs
Position
18:2469950..2583389
Genome browser
AA seq
3024 aa
AA seq
DB search
MFAVRIVTADFYLQSPIKDLDVCYSEFRESEVKKVPVVRIFGATPAGQKTCLHLHGVFPY
IYVPYDGYGQQPERYLRQVAFSTDRALNVAMGNPASSVQHVFKVVLVSGMPFYGYHAKEK
HFMKIYLYNPQMVKRVCELLQSGAVMNKSYQPHEGHIPYLLQLFIDYNLYGMNLLNLGAV
KFRRGHNKGDSAVVPGRQTPSSRPSVSPWKSPGTSKLDDSTLGGTFVRWEEDAIPCSLVL
DAVEKQSTCELEVDAVAVDVLNRLEIENQIGRNPGLQAIWEDEKQRRREKNQASQVETPE
SQDRGFVTSTESEKIFMKRFKEILKENEFDVTQGSCVSEREDQEDLLCDLTLHSDPLTPE
GLPCTPANAVEVHRHSQPDSVRSSVKVPEEAVVDEEAILSLLENSQTFLPLSQTSNHSPL
LDSSQDQAIIDLLAGLESDGFCRTPVRQNSQSQSLPGAGSYHCNSDEEEAGPELDKLEAE
LSVLMSQRWDNQPPENSPSPRPGVKEPEDCSSDEQQESSDEDMEWSGNNSLFANLSIPQL
DGAADESSDSSLTDSGSRTQSSLIVTEKMLGKKNPFSAETVHLEPPSPAKILLECKHPEH
RPVNVLDKEKPLDMHFQSKSSQDSSTGFKFNKEIPYIPPVKHPIPCKLPNHPEVSPICVD
KQDIRPMYTYDQKTSIALDKTDLESFPFGNGKVTKNGKYSSIKNVETNCLSILQNHRTFS
LCYSELRNCTAKTELELSQKDCKSPILRNISSAPSPMVENEFLDPQQEEMGQDSEEGDVG
ELKIRYEDYQENKTDRTIVAQQEAHYKFFPSVILSNCLSRKKAGSKKLADPCSKLEQAQP
RRSSLKVCKKRLGMAGQRNKLNTVESSTSDSQVYTGLTSTTPACPVTSDTEMPALEDKLI
KESEPIQNGPIKEGEPITEKEPESEERSVNEQTEPLSEPPATSAAIFSEGAKDSAEERLS
PLHDLSAKVTCTKPSALPGSKYTLRAKRKMIYDSEDGEYLGVPHSKTPASVKERLKDPNV
PSGQEVKYQKRRKKEPPIIIKYIIINRFKGQKNMLVKMSKVNAEEQLVLLTPDKLQQYNQ
LAPLKDFWPKVPESTAAKFPITEPKVKKQPKRKAKVSPTNKKTVGNSSKPQVRQGVRVRR
TKGCQRGPILPSLPPPRPCYCELTDDHDIEYTDVMEQLGYLSDRSPSPTHSTPPRCWSPS
DPLMDSMSSEHMINPLSDPCLSSAFHKPHAVSSTKGAQKKCQTAKPKKSTDTKRKVGRSV
TKPRDDKNPKKEKLRQRSGAAPIQRKKAKDAAEGTVNSSTTTTRPRKSRKKKTEEPKSHD
SSKDTSQLLFPEDELPPSQSFSQYVPPFQRPVSTDGNSRGSSQPASILASNSADQSIQPK
VEDCETSIMEVNQSFSSPVQLKQQGCQTTVVKAEASQEECTAPPPPLAGRPLLENSKDSQ
LVAAFPHSGPKNGELPTLYETPSGLTVLKQLLQKRQQGQALPLQVVGTDSHFTAIAQATV
LLDPTTKPANPKRAPSTAPRKPRAPKSTPKDKKPRIRKGKTSSTQPNLSVKQEGNMADDC
PLFLSDPGLDSCNFIEDSLSPELPHNYAFDINAIDQTEFSSPYSSSQFVLTDKHLPVKFL
SDVNQEAVSAPALGFEKKRDRLFDSGEELQRGCDWHKDGPVSPDLFDRPKNGESESNHLA
FLDSEKIQSREWDFSLGKAHTLSPFQDFHCERKELLFSVFDPVLPLPLSSASFVDHEGSP
TGELLEGIDGLSSSSSPRSISSLSQVRASQLLRGAGGGAHILKPLMSPPSREEILSTLLH
LEMSEATFQEPFCSNPSDVPGKPMEVGGRKLTVRTRLAKELAEFSGDLSLEGLHFWKTAF
SAMTHPAINITSSSQAQGAEASGASKEQAELHQSSASDKKVILLPCKNPPSRERVQLWLE
ARKQYESLQKGLRRRESPQRTEQPAASSCPVVKVELAKRLSTMRTQRRKKCNLSLIISPM
MNTGSHCKSTEVSPVSDEGGVDIEQEVEKKHDDDDETTSPESPELPTWQQSCQSSPLGPD
RLSENRQNSPEPLSLRHSDSPERLGDNLSPSLLNVSNKEEGRTSPLILHSTPFLRRRRRS
KEDLEPVCSTPISGEDAVSQRLQQRRRSQADPLRRVLLTTQMKNQFAALNVPKKENSQIE
GPSIANSYGFKISMQNLQDAKALHEVQYLTLMAMELHARTRRDLEPDPEFDPICALFYCL
SSDAPLADIDSTQLTGAIVVDKDYQSCDPGHRGAAPLLVRSGVSGLQVTYAADEKVLFQE
LIAIMRRFDPDILVAYEVQMRSWGYLLQRAAALGVDLCQQLSRVPGDSKENRFAAERDEY
GADTMSEINIIGRITLNLWRVMKTEAALNNYTFENVAFHILHQRFPLYSPRTLSDWFDHK
THLYRWKMVDHYVSRVHGTMQLLQQHDIIGRTSELARVFGIQFFHVLTRGSQYRVESMML
RVAKPLNYIPVTASVQQRAQQRAPQCIPLVMEPESRFYSNSVIVLDFQSLYPSIVIAYNY
CYSTCLGHVDSLGTPDEFKFGCTSLRVPPELLYQLRNDITVSPNGIAFVKSSVRKGVLPS
MLEEILNTRIMVKQSMKTYKQDKALMRLLDARQLGLKLIANVTFGYTAANYSGRMPSVEV
GDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSMFVLLKGATKEQAFKIGNEIAEAV
TATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYESLDQKEPVFDAKGIETVRRDNCPAVSK
ILQRSIKLLFETRDISQVKQFVQRQCVKVLDGRASMQDLTFAKEYRGSMSYRPGACVPAL
ELTRRMMAYDRRLEPRVGERVPYVIVYGMPGVPLIQLVRRPMEVLQDPGLRINATYYITK
QILPPLARMFQLIGVDVFSWYQELPRIQKASCSSAVGGEEVGRKGTISQYFTTLHCPVCD
ELTQLGVCSQCRAEPQRVAVTLYQDMRQWESQQDQLLKICRNCSGCAERQVSCVSLDCPT
LYKLSRVNRQLSKAPYLRQLLEQF
NT seq
9075 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgtgcgtatcgtcaccgcagacttctatttgcaaagtcccattaaagacctg
gacgtgtgctactccgagttcagggagagcgaggtgaagaaagtgccggtggtgcggatc
ttcggagcaacacctgcaggccagaagacatgcctccacctccacggcgtgttcccctac
atctacgtaccctatgatggctacggccaacagccagagcgctacctgcggcaggtggcc
ttcagcaccgacagggccctcaacgttgccatgggaaaccccgcctccagcgtccagcac
gtcttcaaggtggtgctggtctctggcatgcctttctatggctaccacgctaaggagaag
cactttatgaagatctatctgtacaatcctcagatggtcaaaagggtctgtgagctgtta
caaagcggagcggtgatgaacaagagttaccagccccacgagggccacatcccctacctg
ctgcagctcttcatagactacaatctgtacggcatgaacctgctgaacttgggggctgtc
aagttccgcaggggccacaacaaaggagactcagcagtggtcccaggcaggcaaactccc
agcagtcgtcccagcgtcagcccctggaagagccccggcacctccaagctcgacgacagc
accctggggggcacgtttgtccgctgggaggaggacgccataccctgctccctggtcctg
gatgcggtggagaagcagagcacctgtgagctggaggtcgatgccgtggctgtagacgtc
ctcaaccgcctggaaatcgaaaatcagattggcaggaacccgggcctgcaggccatctgg
gaggatgagaagcagaggaggagagagaagaaccaggcctcccaggtagaaacccccgag
tcacaagatcgtgggtttgtcacgtcaacggagagcgagaaaatcttcatgaagagattc
aaggagatcctgaaggagaatgagtttgacgtgacacaaggttcgtgtgttagcgagagg
gaggaccaagaggatcttctctgtgatttgactctccattctgaccccctgacgcctgag
ggactgccgtgtacccccgctaatgctgtggaggtgcacaggcactcgcagccagactct
gtgaggagcagtgttaaagtccctgaggaggctgtcgttgatgaggaggccatcctgagt
ctcctggaaaacagccagaccttcctcccactctcccagacatccaaccattcgcccctg
ttagacagcagccaagaccaggccatcatcgatttgctggcaggactggagagcgatggt
ttctgcaggacccccgtcaggcagaactcccagtcccagtcccttcctggtgccgggagc
taccactgcaacagtgatgaggaggaggccgggcccgagctggacaagctagaggccgag
ctcagcgtgctaatgtcacagcggtgggacaaccagcctcctgagaactcgccctcacca
aggccgggtgtgaaggagcccgaggactgctccagtgacgagcagcaggagtcctctgac
gaagacatggagtggagcgggaataactctctgttcgccaacctgtccatcccccagctt
gacggggccgcagacgagagcagcgattcatccttaacggacagtggctccaggacccag
tcttctctcatagtcacagaaaagatgctcgggaaaaaaaatcccttctccgcggagacg
gttcacctggagccaccttctccagcgaagatccttcttgagtgcaagcaccctgagcac
agaccagttaatgtgcttgacaaggagaaaccactcgacatgcactttcaatcaaaaagc
agccaggacagttcaacagggttcaagtttaataaagaaatcccctacatcccgccagtc
aaacatcccatcccctgcaagttacccaatcaccctgaggtgtctcccatctgcgtagac
aaacaagacatacgacccatgtacacctatgaccagaaaacctccatagctttggataag
acagacctagaaagtttcccatttggtaacggaaaggtaaccaaaaacgggaagtacagc
agcataaagaatgtagaaacaaactgtctgtcaattcttcagaatcacaggaccttctct
ctctgttactcagagctgagaaactgcacagctaagacagagctggagctgagccagaag
gactgtaaaagccccatcctgaggaacatctcctcagccccgtcacccatggtagagaat
gagtttcttgatcctcagcaggaagaaatgggccaggacagtgaggagggagatgttggt
gaactcaaaatcaggtacgaggactatcaggaaaataagactgacaggacaatagtggcc
cagcaggaagcgcattacaagttcttccccagtgtcatcctctccaactgtctgagtagg
aagaaagctgggagcaaaaagctggctgatccctgcagcaagcttgaacaggcccagcct
cgtagatctagcctaaaagtgtgtaaaaaaaggttgggaatggcagggcagagaaacaaa
ttaaacacagttgaaagctccacctctgacagccaggtttacaccggcctcacctcaacc
acacctgcttgtccagtgacatcagacacagagatgccagctttggaggataagttaata
aaagagtctgagccaattcaaaatgggccaataaaagagggagagccaatcacagagaag
gagccagaaagtgaggagaggtctgtaaatgaacagacagaaccactttcagagcccccg
gccacctccgctgccattttttctgaaggagctaaagactccgcagaggaaaggttaagc
ccattacacgatttatcagctaaagtcacctgtactaaaccttcagcactgcctggtagt
aaatacaccctgagggccaaacggaagatgatctatgacagcgaggatggagaatactta
ggtgtccctcattctaagactccagcctccgtcaaagaaaggttgaaggaccccaatgtc
cccagtgggcaggaagtaaaataccagaaacgtcgtaagaaggaaccccctatcatcatc
aagtacataattatcaaccggttcaaaggacagaaaaacatgctggtgaagatgtccaaa
gtgaatgcagaggagcagttggtgttgctgacaccagacaagctacagcagtacaatcaa
ctagcccctcttaaggatttctggcccaaggtgccagaatccactgctgccaagttcccc
ataactgagccaaaggtcaaaaaacagcccaaaagaaaggcaaaggtcagccccacaaat
aagaaaacagtcggcaactcctcaaaacctcaagtaaggcagggtgttagggtcagaagg
actaaaggctgccagagaggcccaattctaccctctttaccaccccctcggccatgttac
tgtgagcttactgatgaccatgacattgagtatactgatgtcatggaacagttgggctac
ctctctgatagatccccaagccccacacactcaacaccccctcgttgttggtcaccaagt
gaccctctaatggacagcatgagttcagaacacatgataaacccactcagtgacccatgt
cttagttctgcttttcacaagccacacgcagtgtcttcaaccaaaggagcacaaaagaag
tgtcaaactgccaaaccgaagaaatccacagacactaaaaggaaagtaggcaggtctgtt
actaagcctcgggacgacaagaatcccaaaaaagagaaattaagacaaaggagtggtgct
gctccaatacagaggaagaaggctaaagatgcagctgaaggcaccgtcaacagttctaca
accaccacaagacctcgaaagtctcgcaaaaagaagactgaggaacccaaaagccatgac
tcaagtaaagacacctcccagctccttttcccagaggacgagttacccccttcccagagt
ttctctcaatacgtccctccatttcagcggccagtgagcacagatggcaacagccgtggc
agttcccagcccgcatcaatattagcctctaactcagcagaccagtctatacaaccgaag
gttgaggactgtgagacatccatcatggaggtcaaccaaagcttttcatcaccggttcag
ctgaagcaacaaggttgccagaccactgtagtaaaggctgaggcttcacaagaggagtgc
acggctcctccacctcctttggctggtagacccttactggaaaacagtaaagactcccaa
ttagtagcagccttcccacactcgggccctaaaaacggggagctccccactctctatgag
accccctctggcttgactgtcctcaagcagcttctccagaaaaggcagcagggacaggct
cttcctctacaagtggtcggcacagacagccacttcactgccatagctcaggccacagtg
ctactggatcccacaactaagccagctaatcccaaaagagctccctccaccgctccacgg
aaacccagggccccaaaatctactcccaaggacaaaaagcccagaatcaggaaaggcaag
acaagcagcacccagccaaatctatcagtgaagcaggagggcaacatggcggatgattgc
cccctctttctgtcagacccaggcctggacagctgcaacttcatagaggacagcttgtca
ccagagctcccacacaactatgcctttgatataaatgccattgatcagacggagttctcc
agcccgtacagcagcagtcagtttgtcctgactgataaacatttaccagttaagttcctg
agtgatgtcaaccaggaagctgtatccgctccagcactgggctttgagaagaaacgtgat
aggctgtttgattctggggaggagcttcaaagaggctgtgactggcacaaagatgggcct
gtcagccctgacctctttgatagacccaagaacggggagtctgaatcaaatcacctcgca
ttcctcgactcagagaaaatccaaagcagagaatgggacttctctttaggtaaagcccat
acactgagcccctttcaagactttcactgtgagagaaaagagctgctcttttccgtcttc
gatcctgtcctgcctttgcctttaagctctgcgtcattcgtcgaccacgagggctcacca
acaggagagcttctggagggcattgatggactatcgtccagtagctctccgcgctccatc
agctcactatcccaggtgagggcaagccagctgctgcggggagcgggaggcggagcccac
attctcaagcccctcatgtctcctccaagccgggaggagatcctcagcactctgctgcac
ttggagatgtcagaggccaccttccaggagcccttctgcagcaacccctctgatgtgcca
gggaaaccaatggaggttggcggccgtaagttaacggtgcgtactaggctggctaaggag
cttgcagagttcagtggagatctgtctttggagggcctgcatttctggaaaactgccttc
tctgccatgacacaccctgccatcaatattacctcatcttcccaagcccagggagctgag
gcctcaggcgcaagtaaagagcaggctgagcttcaccagtcctcagccagtgacaagaag
gtcatccttctgccctgcaaaaacccaccaagcagagagcgtgtgcagctgtggctggaa
gccaggaaacagtacgagagtttacaaaaagggctgagaaggagggagagcccacagaga
actgagcagccagctgcttccagctgtccagtagtaaaggttgagctggcgaaaagactc
tctactatgaggacccagaggagaaagaaatgcaacctgtccctaatcatatctcccatg
atgaatacaggctctcattgtaaatccacagaggtgagtccagtttcagatgaaggcggt
gtggatattgagcaggaggtggagaaaaaacatgacgatgatgatgaaaccacctctcca
gagtccccagagctgcctacctggcagcagtcttgccagtccagccccttagggccggat
cggctcagtgaaaacaggcaaaactctccagaaccactgtcacttcggcactcggactcc
ccggaaagactaggggacaatcttagtccttcgctcctcaatgtcagtaacaaggaagag
gggaggactagtcctctcatccttcacagcaccccctttttaaggaggaggcggagaagc
aaggaagatctggagccagtgtgcagcacgcccatatctggggaggatgcagtttctcag
agactccagcagagaaggagaagccaagcggacccactgagaagagtgttactgaccaca
cagatgaagaaccagtttgctgctttgaatgtgccaaagaaagagaactctcagattgaa
gggcccagcatagccaactcttacggcttcaaaatcagcatgcaaaacctgcaggatgcc
aaagctctgcatgaggtccagtaccttacactgatggccatggaactccatgcaagaacc
cgaagggacctagagcctgaccccgagtttgaccccatatgtgccttattctactgcctc
agttctgatgctcccttggcagacatagacagcacccagctgacaggtgccatcgtggtg
gacaaagactatcaaagttgtgacccaggtcacagaggagccgcgcccctgctggtcagg
tcgggcgtctccgggctgcaggtgacgtacgccgctgatgagaaggtgctgtttcaggag
ctgatcgccatcatgaggaggtttgacccagacatcctggtggcgtatgaggtgcagatg
cgttcctggggctacctcctccagcgggctgcagcgctcggagtggacctgtgtcagcag
ctgtcacgagtgccaggtgactccaaagagaaccgcttcgctgcagagagggatgagtac
ggcgccgacaccatgtctgagatcaacatcatcggacgcatcaccctcaacctgtggagg
gtgatgaagactgaggccgcgctgaacaactacacttttgagaacgtggccttccatatc
ctccaccagcgcttccccctgtacagcccccgcacgctgtccgactggtttgaccacaag
acccacctctacaggtggaagatggtggaccactacgtgagccgtgttcacggcaccatg
cagctgcttcagcagcatgacatcatcggcagaaccagcgagctggcccgagtgttcggg
attcagttctttcatgttctgacccgaggatcacagtaccgcgtagagtccatgatgctg
cgtgtggccaagccgttgaactacatccctgtgacagccagcgtgcagcagcgagcccag
cagcgggcgccgcagtgcattcctctggtgatggagccggagtcgcgcttctacagcaac
tcagtgattgtactggacttccagtcgctctatccctccatcgtcatcgcgtacaactac
tgctactccacctgcctcggccacgtggacagcctgggaacgcctgatgagtttaagttc
ggctgcacctccctgcgggttcctccggagctcctctaccagctccgcaatgacatcacg
gtgtcacccaacggcatagccttcgtcaagtcctcagtgcgtaaaggggtcctgcccagc
atgctggaggaaatcctgaacacaaggatcatggtgaagcagtcgatgaaaacgtacaag
caggacaaggctctgatgaggctgctggacgcccggcagctcggactcaagctcattgcc
aacgtcaccttcggctacaccgccgccaactactctggccgcatgcccagcgtggaggtt
ggagacagcatcgtccacaaagccagagagaccctggagagagccatcaagctggtcaat
gacactaagaaatggggagcgcgtgttgtgtacggagacaccgacagcatgtttgttttg
ctgaagggagccaccaaagagcaggccttcaagatcggcaatgagatcgctgaggcagtg
accgcaaccaaccccaagccggtcaagctcaagtttgagaaggtgtacctgccctgcgtg
ttgcagacaaagaagcgctacgtgggctacatgtacgagagccttgaccagaaggagccc
gtgtttgacgccaaagggatcgagacagtgcgccgtgacaactgccccgctgtttccaag
attctgcagcggtccattaagctgctgtttgagactcgggacatcagccaggtgaagcag
tttgtgcagcgtcagtgcgtgaaggttctggacggccgggccagcatgcaggacctgacc
ttcgccaaagagtaccggggcagcatgtcgtaccggcccggagcctgcgtgcctgccctg
gagctcaccagacgtatgatggcgtacgaccgtcgcctggagccacgcgtgggcgagcgg
gtgccctacgtgatcgtgtacgggatgcccggcgtgcccctcatccagctggtgcgtcgg
cccatggaggtgctgcaggaccccggcctccgcatcaacgccacctactacatcaccaag
cagatcctgccaccactggcccgcatgttccagctgatcggagtggatgtgttcagctgg
taccaggagctccccaggatccagaaggcgtcctgctcctcggcggtgggcggagaggaa
gtggggaggaagggaaccatttcccagtacttcaccacgctccattgccccgtgtgtgac
gagctgacccagctgggcgtgtgctcgcagtgccgcgccgagccccagcgggtcgccgtg
acgctctaccaggacatgagacagtgggagagtcagcaagaccagctgctgaagatctgt
aggaactgtagcggctgtgcagagcgccaggtgtcctgtgtgtctctggactgtcccacc
ctctacaagctgtcccgggtcaacagacagctctccaaggccccctacctccgacagctg
ctggagcagttctga
DBGET
integrated database retrieval system
