Perca flavescens (yellow perch): 114573355
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Entry
114573355 CDS
T07494
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03040
Spliceosome
pflv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114573355
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114573355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflv03041
]
114573355
Spliceosome [BR:
pflv03041
]
Common components
Common spliceosomal components
SR proteins
114573355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
114573355
NCBI-ProteinID:
XP_028461317
LinkDB
All DBs
Position
18:complement(23777619..23784190)
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AA seq
306 aa
AA seq
DB search
MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGSGGGGGGGSAGGRFSDRYGRGSQNSRSRNPPPMRTEN
RLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASCSDLKNAMDKLSGKE
INGRKIKLIEAARKRSRSRSRSESSSRSRSRSRGRSPSRSPRRSRSPAHKAHNRSRSPSV
SPVGGASSPTSKSKDPPKRSSKTSKSATPPSPPPAQRASVSRSRSRSRSRSRSRSRSRSL
STDSQR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttgtcgtattttcatcggccgtttgagcccatcagccagagagaaggatgtg
gagaggttcttcaaaggatacggccgcattcgagatatcgacctcaagagaggctttgga
tttgtggagtttgatgaccccagagatgccgaagatgcagtttatgagcttgatggcaaa
gagttgtgcaatgaaagggtgaccattgaacacgcccgtgtacgtctgcgtggcggccgt
ggcagaggaagcggcggtggcggtggcggtggtagtgcaggaggacgtttctctgatcgc
tatggcagaggttcccagaacagtcggagccgaaaccctcctccgatgcgcactgagaac
cgcctgattgtggagaacctttcctctcgtgttagctggcaggacctgaaagatttcatg
agacaagctggagaggtgacatttgccgacgcacatcgccccaagctcaacgaaggggtt
gttgagtttgcctcttgcagcgatctgaaaaatgccatggacaaactgtctgggaaggaa
atcaatggcaggaaaatcaagctcattgaggcagccagaaagaggtcgagaagtcgttcc
cggtctgagagctcctctcgctcccgctcccgttctcgtggccgctctccatcccgctcc
cccagacgctcccgcagccccgcccacaaggcccacaaccgttcccgctcccccagcgtg
tcccccgtcggcggcgcttcctccccaacctccaaatcaaaggacccccctaaacggtcc
tccaagacgagcaaatctgccaccccgccctcccctcctcctgctcagagagcctccgtc
tcccgttctcgctcccgttcccgctctcgttcccgctcccgttcccgttcccgctctctt
tctactgacagccagcgctaa
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