Perca flavescens (yellow perch): 114573542
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Entry
114573542 CDS
T07494
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114573542
Membrane trafficking [BR:
pflv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114573542
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
114573542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
WD40_Prp19
WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
CFAP43_N
Beta-prop_Vps41
Beta-prop_VPS8
Synaptobrevin
WD40_like
Motif
Other DBs
NCBI-GeneID:
114573542
NCBI-ProteinID:
XP_028461593
LinkDB
All DBs
Position
18:complement(19057509..19163087)
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AA seq
1125 aa
AA seq
DB search
MKKFNIRKVLDGLKEVSSSTPSVQVGPQENHLIQETLQSDHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIHLQFLINEGALVSALADDSVHL
WNLRQKRPAILHSLKFSRERITFCHLPFQSKWLYIGTERGNIHLVNVESFMLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFEAGIVVLWDLKSKKADYRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNIRGQGKPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
IGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYSNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPINGGNWGQGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFDR
NRSKEDKSSTEVSDEDPFAIQIMAWCPESRMLCVAGVSANVIIYRFSKLEVTTEVVQLVE
VRMQYELNDIESPDGGGGGGEQTSALPTPGASPQTSGPPSHPSTSSNNSDGGNMPCLKVR
STPLKQSAGYQVDLVVQLVWVSGEPPQQITSLALNSSYGLVVFGNSNGLAVVDYVQKTVV
LNLGTVELYGSNDPYQRQPRSPRKSRQPSGGLCDINEGSATSEDRCKSPTSAKMSRKLSL
PTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDKEARESISSFHFSDTFVRK
GDSALTPCLYVGTTLGTMLSLALTLPPAGEQRQLQPVIISPTGILVRLKGSVMRMAFLDS
TGSMLPPPFEPWFEPNVTADGEEREKVRKRRPVSVSPSTSQDLNESQYAVVCSEKQAKVI
SLPSQTCIYKHSITETSFILRADVVQMSQGVSLACFCANGHIMTLSVPGLRPLMDVNYLP
LTDMRIARTFCFTNLGQAMYLCSPTEIQRITYSQDTCENLQEMLGELFTPVETPEAPNRG
FFKGLFGGGAQSLDREELFGEVSAGKASRSLAQHIPGPGGIEGMKGAASGIVGDLARARI
ALDERGQKLGELDERTAAMMASADSFSKHAHEMMLKCKDKKWYQF
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcaggaaggtgctggacggcttgaaagaggtgtcctcctccacc
ccgtctgtccaagtggggccacaggagaaccatctgatccaggagaccctccagtccgac
catttccagctctgcaagactgtccgtcatggcttcccctatcagccatcgtccatggct
ttcgaccccgtgcagaagatactggccattggcacccagagtggagctctcagattgttt
ggtcgtccaggcgtggagtgttactgtcagcacgagagtggagcagccgtcatccatcta
cagtttctcatcaatgagggagcgctggtgagtgctctggctgacgacagtgtccacctg
tggaacctgaggcagaagagaccagccatcctccactccctcaagttcagcagagagaga
ataactttctgccacctgcccttccagagtaaatggttgtacattggcacagaacgaggg
aacatccacctcgtcaacgtggagtcctttatgctctcaggctacgtcatcatgtggaac
aaagccattgaactgtcctccaaggctcaccctggaccagttgtccacataagtgacaac
cccatggatgagggaaagcttataattggatttgaggctgggatcgtggtcctgtgggat
ctgaaatcaaagaaggccgactatcgctacacttacgatgaggcgatccactcagttgcc
tggcatcacgagggcaagcagttcatttgcagtcactcagacggaactctgaccatatgg
aacatcagaggccagggcaagcccatacagacaatcaccccacacggaaaacagcccaag
gacgggaagaagccagagccttgcaaacccattctcaaagtggagtacaaaaccactaga
attggggagccctttataatcctgtctggtggtctgtcctacgacacggtgggccggcgg
ccttgtttgacagtaatgcacgggaaaagtaccgcggtgctggaaatggactatcctata
gtagacttccttacactctgtgagacaccatactctaatgattttcaggaaccttacgct
gtggtggtccttttagaaaaggatttagtggtgatcgaccttgcacaaaatggttaccct
atattcgagaacccctatcctctgactatccacgagtctcctgtgacctgctgcgagtac
tttgccgactgccctgtggacctcatacctgcactttactctgttggttcgcggcagaaa
cgacagggctacagcaagaaggaatggcctattaatggcggaaactggggtcaaggcaca
cagagctacccagagatcatcatcactgggcatgctgatggaactgtgaagttctgggat
gcttctgcaataatgctccaggtgctctataagctcaaaacagccaaggtgtttgacaga
aaccggtccaaggaggacaagagcagcaccgaggtgtcagatgaagacccctttgccatt
cagatcatggcctggtgccctgagagccggatgctgtgtgtggccggggtgtcagccaac
gttatcatctaccgcttcagcaaactggaagtaactactgaggtggtgcagttagtagaa
gtgcgaatgcagtacgagctgaacgacatagagtctccagacggcgggggtggaggggga
gaacagacatcagcgcttcccacccccggtgcctcacctcagacaagcggcccaccttca
cacccctccacgagcagcaacaactctgacggaggcaacatgccctgcctcaaagtgcgc
agtacccctctgaagcagtctgcaggttaccaggtagatttggtggtccagttagtgtgg
gtgagcggagagcctccgcagcagatcacaagtctggcgctcaattcctcctacggcctt
gtggtgtttggcaacagtaacggtctggctgtggtagactacgtccagaagacggtagtg
ctcaacttggggacggtcgagctttatggctccaatgacccctaccagagacagccccgc
tcgccaagaaagtcacggcagccttctggaggtctgtgcgacatcaacgagggctcagcc
acatcagaggaccgctgcaagtcccctacttcagcaaagatgtcacggaaattaagcttg
cctactgagctaaagccagacttggtcctcctgtctgtatgcccgccgcggggtgccaac
ccattagaccacagggacaattctttcagccgctcgcgctcctccagcgtcaccagcatc
gacaaggaagcacgagagtccatcagctccttccactttagtgacacctttgtccggaag
ggggacagcgctttgacaccctgcctgtatgtgggcaccactctgggcaccatgctgtct
ctagctctcacattgccacctgctggagagcaacggcaactgcagccagttatcatttca
cctacgggcattttggtgcggctgaagggaagcgtcatgcggatggctttcctggactca
acaggttccatgctgccccctccgtttgagccctggtttgagcccaacgttacagcggat
ggtgaagaaagagagaaggtccgcaagcgccggcctgtctccgtatccccttctacctcc
caggacctcaacgagagccagtatgctgtggtgtgttccgagaaacaggccaaagtcatt
tccctcccttcccagacctgcatctataaacacagtatcacagagacctccttcatccta
agggcagatgtggtgcagatgagccaaggcgtgtctctggcttgtttctgtgccaatggc
cacatcatgaccctcagtgtgccgggactgagaccgctcatggatgtaaactacctgcct
ttgacagacatgcggatagcaaggacgttctgcttcaccaacctgggtcaggccatgtac
ctctgctcccccactgagatccagaggattacttacagccaggacacctgtgaaaaccta
caggagatgctgggtgaactttttacaccagtggagacaccagaggcacccaacagaggg
ttcttcaaaggcctctttgggggaggagcacagtcgttggacagggaggagctatttggt
gaggtgtcagctggaaaggcatcacgaagtctggcccagcacatcccaggcccgggtggc
attgagggcatgaagggggcagcgtctggtatagttggagatctggcacgcgcccggata
gcactggatgaaagaggccagaaactgggcgagctggatgagaggacagctgccatgatg
gccagcgcagactccttttccaaacacgcccacgagatgatgctgaagtgcaaagacaaa
aaatggtaccagttctga
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