Paludibacterium flexuosum: THUN1379_00150
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Entry
THUN1379_00150 CDS
T11758
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pflx Paludibacterium flexuosum
Pathway
pflx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THUN1379_00150 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflx03021
]
THUN1379_00150 (rho)
03019 Messenger RNA biogenesis [BR:
pflx03019
]
THUN1379_00150 (rho)
Transcription machinery [BR:
pflx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
THUN1379_00150 (rho)
Messenger RNA biogenesis [BR:
pflx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
THUN1379_00150 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
S1CSD-TOTE-2
NACHT
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BEV70533
LinkDB
All DBs
Position
19851..21059
Genome browser
AA seq
402 aa
AA seq
DB search
MAIANEIDGANRLRKQDLIFALLKNQAKKGESIYGEGTLEVLPDGFGFLRSPDTSYLAGP
DDIYVSPSQIRRFNLHTGDSIEGEIRTPKDGERYFALVKVDKVNHDAPENSKHKILFENL
TPLFPTEPLHLERDIRAEENFTGRIIDLIAPIGKGQRGLLVAPPKSGKTVMLQHIAHAIT
ANHPEVELIVLLIDERPEEVTEMQRSVRGEVVSSTFDEPATRHVQVAEMVIEKAKRLVEH
KKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTII
ATALIDTGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRIFPALNINRSGTRREELLIPQEK
LQRIWVLRKLLYPMDDLDAMEFLQDKIRATKSNSAFFDSMRR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggctattgccaatgagatcgacggtgccaaccggttgcgcaagcaagatctgatcttc
gcgcttttgaaaaaccaggccaaaaagggcgaaagcatttatggcgaggggacgctggag
gtactgccggacggattcggtttcctgcgcagccctgacacctcgtatctggccggcccc
gatgacatttatgtcagcccgagtcagattcgccgtttcaatctgcataccggcgattcg
atcgaaggcgagatccgcacgccgaaagatggcgaacgctacttcgccctggtgaaggtt
gacaaggtcaaccacgatgccccggaaaactccaagcacaagatcctgttcgaaaacctg
acgccgctgttcccgaccgagccgctgcatctggaacgtgatattcgtgccgaagaaaac
ttcaccggccgcatcattgatctgatcgccccgatcggcaagggtcagcgcggtctgctg
gtggcgccgcccaagtccggcaagaccgtgatgctgcaacatattgcgcatgccatcacg
gccaatcaccccgaagtcgaactgatcgtgctgctgatcgacgaacgtccggaagaagtg
accgaaatgcaacgctcggtgcgtggcgaagtggtctcctccaccttcgacgaacccgcc
acccgtcacgtgcaagtggccgaaatggtcatcgaaaaggccaaacgcctggtcgagcac
aagaaggacgtggtcatcctgctggactccatcacccgtctggcgcgtgcctacaacacc
gtggtgccggcttccggcaaggtgctgaccggcggtgtcgacgccaatgccctgcagcgt
ccgaagcgcttcttcggtgcggcgcgcaatatcgaagagggtggttcgctgaccatcatt
gccacggccctgatcgataccggctcgcgcatggatgacgtgatctacgaagaattcaag
ggtaccggcaacatggaaatccacctcgaccgccggatggcggaaaaacggattttcccg
gcgctcaacatcaaccgttcgggtactcgccgcgaagagctgctgattccgcaggaaaag
ctgcaacgcatctgggtgctgcgcaagctgctctacccgatggatgatctggacgcgatg
gagtttctgcaggacaagatccgcgccaccaaatccaactctgccttcttcgactcgatg
cgtcgctga
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