Paludibacterium flexuosum: THUN1379_17140
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Entry
THUN1379_17140 CDS
T11758
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
pflx Paludibacterium flexuosum
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Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
BEV72232
LinkDB
All DBs
Position
complement(1858256..1860388)
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AA seq
710 aa
AA seq
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MPTAPHQRASELRALLDRYGREYYELDAPSVPDAEYDRLMRELQTLEAQFPELQTADSPT
LRVGGAPLDAFEPVTHAVPMLSLNNAFSDMEQTDPALRHAELIQFDERVTRELASGTVEY
AVEPKFDGLAISLLYRDGVLVQAATRGDGLTGENVTENVRTVRGIPLRLQGEAWPALLEV
RGEVLMFKADFERLNQAQEAQGEKRFANPRNAAAGSLRQLDSRITARRHLSFFAYAIARI
EGADWPSTHQGEMDWLAQLGLPVVAPDLRPVVQGLDGLTGYYETVLSRRPGLPYDIDGVV
YKVNRLDQQTQLGFVSRAPRFAIAHKFPAEEALTVVEAVEEQVGRTGAITPVARLQPVFV
GGVTVTNATLHNQDEVLRKDVRVGDTVIVRRAGDVIPEVVSVVLERRPMRDVPGADLFSP
AQEPVYPAYRLPTHCPVCGSHIVKEEGEAIARCSGGLFCSAQRKQAIWHFAARRAMDIDG
LGDKLIEQLVDRGLVHTLADLYRLDAATLAAMERMGQKSADNLVAAIEASKQTTLARFIY
ALGIRNVGEATARDLARHFAELSVLMALGEGLDDPLQRARALDTLMAVPDVGPVVAESIL
DFFAEPHNREVVNALIEAGVHWPQEAAVDVASLPLAGKTLVLTGTLPSLSRDEAKALIEA
AGGKVAGSVSGKTDYLVAGEAAGSKLDKARSLGIAILDEAGLRQLLETKT
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgcccctcaccaacgcgcctccgagttgcgtgccttgctggaccgttacggt
cgcgaatactacgaactggatgccccttcggtccctgatgccgaatacgaccgtctgatg
cgcgaactgcagacgctcgaagcccagttccccgaattgcaaaccgccgactcgccgaca
ttgcgcgtcggcggcgccccgctggatgccttcgagccggtgacgcatgccgttcccatg
ctgtcgctcaacaatgccttttccgatatggaacagaccgatccggccctgcgtcatgcc
gagctgatccagttcgacgaacgcgtgacgcgcgagctggccagtggcaccgtcgagtat
gccgtcgagccgaaattcgatggcctggccatcagcctgttgtatcgcgacggcgtgctg
gtgcaggcggcgacgcggggtgacggcctgaccggcgagaatgtgacggagaacgtgcgt
accgtgcgcggcattcccctgcggctgcagggggaggcctggcccgccctgctggaggtg
cgcggcgaagtgctgatgttcaaggccgacttcgaacgtctgaatcaggcgcaggaggcg
cagggcgaaaaacgttttgccaacccgcgcaatgccgcggcgggcagtctgcggcagctg
gactcgcgcattaccgcgcgtcgccacctgtccttctttgcctatgccatcgcccgcatc
gagggggcggactggccgtccacccatcagggggagatggactggctggcgcaactcggg
ctgccggtggtggcgccagacttgcggccggtggtgcaggggctggatggcctgaccggc
tattacgaaaccgtgctctcgcgtcggccggggctgccctatgacatcgacggcgtggtc
tacaaggtgaaccggcttgatcagcagacccagctgggttttgtctcgcgcgccccgcgc
tttgctatcgcgcacaagtttccggcggaagaggcgctgaccgtcgtcgaggcggtggag
gagcaggtcgggcgaaccggggcgatcaccccggtggcgcgtttgcagccggtttttgtc
ggcggcgtgacggtgaccaatgccacactgcacaaccaggacgaagtgctgcgcaaagat
gtgcgtgtgggcgacacggtcatcgtgcgccgtgccggcgacgtgattcccgaggtggtg
tcggtggtactggaaagacggccgatgcgcgatgtgccgggggctgatctgttctcgccg
gcgcaggagccggtgtatccggcctatcgcctgccgacgcactgtccggtgtgtggctcg
catatcgtcaaggaagagggagaggccatcgcccgctgtagtggcggcctgttctgctcg
gctcagcgcaagcaggcgatctggcattttgccgcccgccgggccatggatatcgatggc
ctgggagacaagctgatcgagcaactggtcgaccgcgggctggtgcataccctggccgat
ttgtaccggctcgatgcggccacgctggcggccatggagcgcatggggcagaaaagtgcc
gacaacctggtggcggccatcgaggccagcaagcagaccacgctggcgcgctttatctac
gccctggggatccgcaacgtcggcgaggccaccgcgcgcgatctggcccggcattttgcc
gagctgtctgtcttgatggcactgggggaggggctggacgatccgctgcagcgtgcgcgt
gcgctcgataccctgatggcggtgccggatgtcggcccggtcgtggccgaatccatcctg
gatttttttgccgaaccgcacaatcgcgaggtcgtgaatgccctgatcgaagccggtgtg
cactggccacaggaagcggctgtcgatgtggccagcctgccgctggccggcaagaccctg
gtcctgaccggcacgttgcccagcctgtcgcgcgatgaggccaaggcgctgattgaggcg
gccggcggcaaggtggccggcagcgtgtcgggcaagacggactacctggtggcgggcgag
gcggcgggcagcaagctggacaaagcccggtcgctgggcatcgccatccttgatgaagcc
ggattacggcaattgctggagaccaagacatga
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