Paludibacterium flexuosum: THUN1379_27720
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Entry
THUN1379_27720 CDS
T11758
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pflx Paludibacterium flexuosum
Pathway
pflx00521
Streptomycin biosynthesis
pflx00541
Biosynthesis of various nucleotide sugars
pflx01100
Metabolic pathways
pflx01110
Biosynthesis of secondary metabolites
pflx01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pflx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
THUN1379_27720 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
THUN1379_27720 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
THUN1379_27720 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
THUN1379_27720 (rfbB)
00525 Acarbose and validamycin biosynthesis
THUN1379_27720 (rfbB)
Enzymes [BR:
pflx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
THUN1379_27720 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
SnoaL_2
Motif
Other DBs
NCBI-ProteinID:
BEV73290
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Position
2978955..2980022
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AA seq
355 aa
AA seq
DB search
MTILVTGGAGFIGGNFVLDWLAGSDEPVVNLDKLTYAGNLETLSSLRHDARHVFVQGDIG
DRSLVAALLAQHQPRAVLNFAAESHVDRSIHGPGEFIQTNVVGTFHLLEAVRAYWQDLPA
GEREAFRFLHVSTDEVYGSLAPEDAAFVESSRYEPNSPYSASKAASDHLVRAWHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLVILNALAGKPLPIYGDGRQVRDWLYVKDHCSAIRRVLA
AGKLGETYNVGGWNEKTNLEVVHTLCATLDALSPRADGQSYASQITFVQDRPGHDRRYAI
DARKLESELGWKPQQTFDSGIRQTVQWYLANQDWVQNVVSGHYRDWVAKQYGDRA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacgattctggtgaccggcggagccggctttatcggtggcaattttgtgctcgactgg
ctggccggcagcgatgagccggtggtcaatctcgacaagctgacctatgccggcaatctc
gagaccctgtcctcgctgcgccatgatgcgcgtcatgtcttcgtgcagggtgatattggt
gaccgctcgctggtcgcggcgctgctggcgcagcatcagccgcgtgcggtgctcaatttt
gccgccgaatcgcatgtcgatcgttcgatccatggtccgggtgaattcattcagaccaat
gttgtcggtaccttccatctgctggaggcggttcgtgcctactggcaggacctgccggcc
ggcgaacgggaggcattccgcttcctgcacgtttccaccgacgaggtctatggctcgctg
gcgccggaagatgcggcctttgtcgaaagcagccgctacgagccaaacagcccttattcc
gccagcaaggccgcctcggatcacctggtgcgcgcctggcaccatacctatggcctgccg
gtactgaccaccaattgcagcaataactacggcccctaccattttccggaaaagctgatt
ccgctggtgatcctcaacgccctggccggcaagccgttgccgatttatggcgatggccgg
caagtgcgcgactggctgtacgtcaaggaccactgcagcgccattcgccgtgtgctggcc
gcaggaaaactgggggaaacctataacgtcggtggctggaacgaaaaaaccaatctggag
gtggtgcataccttgtgtgccacgctggatgcgctcagtccccgtgccgatggccagtcc
tatgccagccagatcaccttcgttcaggatcgccccggtcatgaccgccgctatgccatt
gatgcgcgcaagctggaaagcgagctgggctggaaaccgcagcagacctttgacagcggt
atccgtcagacggtgcagtggtacctggccaaccaggactgggtgcagaacgtggtgagc
gggcactatcgcgactgggtggcaaagcagtacggggatcgcgcatga
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