Pseudomyxococcus flavus: VZL07_04385
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Entry
VZL07_04385 CDS
T11142
Name
(GenBank) Ig-like domain-containing protein
Organism
pfly Pseudomyxococcus flavus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
BiPBP_C
OmpA
Glucodextran_B
Big_3_3
Ig_J
TSP3_bac
PKD
InlK_D3
HYR
Motif
Other DBs
NCBI-ProteinID:
XSE97157
LinkDB
All DBs
Position
complement(1074955..1082976)
Genome browser
AA seq
2673 aa
AA seq
DB search
MTQETFDVPLLSRAFRGRIRLFAAPLALLCAALLGSAAKAAADTFGLGNGTAALTISAPN
TVINTYTEVTAAAPAGQSFVMVASSSGFAVGNLVMVHQTTGLPTEPASGSQTPIDLTATP
VGRWELARIGSVTATRINFTQPLTGAFAATGAQVIRVPEYSTVMVNASGSIVARPWDGAT
GGVVAFLAQNTVTNEGAIHADGRGFRGGFPWNGDGDACTGLDQEWPGGTSKGEGLVPSRF
GGDIFPIPTGTTGRGNIANGGGGGVCHNSGGGGGSNAGAGGIGGRTWVGEEPPASRPVGG
LGGASLTFDPVVRTVFGGGGGAGHGNDDAAGGGSAGGGVVFIRAASLAGAGRVSANGLAG
GDAVGTANDAAGGAGAGGTVYLRVTGALSCSANSVTALGGNGGRTTYDQHGTGGGGGGGR
LLIQGATVGCTPVVTGGAAGTQPTANAPDGLTYGADPGSPGVVTVLPGAFPASLASPVVT
MPANGSITGMRPVISGTAPPNATVVIFVDGVELGRVPADAMGNFSLTPSADLSVGAHIVN
AYATLQGVASVLSNTNTFTVASDTTPPDTTIVSGPPAVTNATSATFSFASNENPVTYECS
LNGGPFVACTNPQTFPGLGEGNHTLAVRARDAAGNLDPTPATYAWTVDTTAPDTTIVSGP
SGTTTSNSATFDFGSNENPVTYECSLDGAPYVACTDPQTFVSLSDGEHTLAVRAVDAAGN
EDPTPATRTWTVDATAPDTTIVSGPPAVTSSTSATFDFSSNESPVTYECSLDGAPFAACA
DPQTFPGLGEGNHTLAVRAVDAAGNLDSTPATYAWTVDTTAPDTTIVSGPSGTTTSNSAT
FDFGSNENPVTYECSLDGAPYVACTDPQTFVSLSDGEHTLAVRAVDAAGNEDPTPATRTW
TVDATAPDTTIVSGPPAVTSSTSATFDFSSNESPVTYECSLDGAPFAACVDPQVFPSVSE
GDHTLRVRAVDGAGNVDPTPAEYAWTVDLTPPELPTIESPADQEEVATATPTLTGTGEPG
TDIYLEVGGATHGPIPVDEDGNWTFTVPEPLEEGPHTVSITGVDAAGNSAGPVTSTFIVD
LTAPDTFIESGPALVTNATTATFDLRSEGGGVAYECSLDAGAFVPCDNPASFTGVPDGDH
LLLVRAVDAAGNVDPTPAQYAWTVDTAAPDTLVASGPATPTSETSATFVFAASEPGATYE
CSVDGAGWVPCTETSTFEGFSDGDHTLLVRAVDPAGNTDPSPAEYTWTVDTAPPAAPLIT
SPADGAVLDDGVVTITGTAEGAESVMLTVGGTTYGPIPVEPSGNWTFTPPVTLPDGPYTV
TVTATDEAGNTSAPTSSGFTVDTTAPDTAIDSGPAVLTNVAIADFVFSSNESPVTYECSL
DGAPFAACPAQAQFGPLGDGEHTLRVRAVDAAGNVDPSPAEHTWTVDATAPGVSITTPAN
GEVLDVAVVTYTGTTEPGSTVTVVVDGVTVGTAEADDAGNWSLPVGDTLSEGSHTVSATA
VDEAGNTGSTVTHTFTVDAQPPETTFITMPPALSNSDSATFTFDSDESPVTYECSLDGAP
FAACPDPATFSGLDDGEHTLEVRARDADGNVDPTPASYTWTVDTTAPETLILSGPPLTEA
PATATFDFDSDTSPVTYECSLDGAPYAPCTDPVTFTGLAEGDHTLSVRAVDEAGNVDDTP
ATYSWVVANDTDGDGLSDTEEVARGTDPNNPDTDGDGLPDGIEVNVAGTDPLDDDSDDDG
ILDGNEDANHNGIVDERETDPNNWDTDGDLLSDGLETGLAEPQGTGTDLTRFVADADPTT
TTDPLNPDTDGGSVRDGIEDANQNGRVDPGETDPLLAADDVDTDGDGIDDATEIALGLDP
NDADSDDDGVPDGVDGITDTDDDGLIDALDPDSDNDGILDGTELGVTLESAPADTDRSSP
NFQPDADPSTTTDPKHPDTDGDGLPDGEEDANHDGRVDTTETDPNNPDTDDDGLSDGVEV
GGANPTNPLNPDTDGDGLTDGVEDANHNGAFDNGETDPNNEDTDAGGVNDGEEVTGGTDP
LDGNDDFVISGRGCSTSGAGTFAPLALLLLGLPLLGRFRRTAGRAGAFPGVAAAVLALAG
MLVAQPASAQVQAPSASQSIDVQQYKPGPSSKDILGVQSAQVHRHLGWNVGVSVNYADKP
LNFMDPRTDRFITALVRSQVGVDLMGSVGLFDRFELGVLLPVTLQRSQAAPMVDPSFAQG
VGSGGIGDLRLVPKARLLEEGAFGLALTVPVVLPTGGGSDFLGGSGVGVQPRLVAEYGER
FRLAANVGVDFRKQQQLRNLNIGNAVSYGVGAELPFTVSEVPLALAATVVGAVGLEQQNT
EERPLELLAALKYRSLGGFSAHVGGGPGLTRGYGTPGFRLLAGFSYSPEPSREPVQAAPV
DTDGDGLVDLDDRCPTEPEDKDGFQDEDGCPDPDNDADGIVDTADACPNEPETANGFEDT
DGCPDTAPPPPPVDTDGDGLMDPDDRCPNEPEDKDGFQDEDGCPDPDNDRDGIPDTVDQC
PNEPETINGVKDEDGCPDKGKVKVQVEGERIVILEKVYFATGKDVILARSFPLLKQVAAV
LRANTQVELVRIEGHTDSQGNDARNLDLSQRRANNVRAFLVKEGIAESRMEAVGYGETKP
VDTNKTAKGRENNRRVEFTIVRIAKVEVEREAH
NT seq
8022 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagagacctttgacgtccccctgcttagtcgggctttccgaggacgcattcgc
ctgttcgccgcacccctggcgctgctgtgcgccgcgctgctggggtccgccgcgaaggcc
gccgcggacaccttcggtctgggaaatgggaccgccgcgttgaccatcagcgcgcccaac
accgtcatcaacacctacacggaggtgacggccgcggcgcccgcggggcagagcttcgtg
atggtggcctcctcgtcgggattcgcggtgggcaacctggtcatggtgcaccagaccacg
ggcttgccgacggagccggcctcgggcagtcagacgcccatcgacctgacggcgacgcca
gtcggccgctgggagctcgcgcggattggcagcgtcacggcgacgcggatcaacttcacg
cagccactcacgggggccttcgcggcgactggggcgcaggtgattcgcgtgcctgagtac
tccaccgtgatggtgaatgcctcgggcagcatcgtcgcccgtccctgggatggagccacg
ggtggcgtggtggccttcctggcgcaaaacacggtgaccaatgagggcgccatccacgcg
gatggtcgggggttccgcggaggcttcccctggaatggtgacggtgatgcgtgcaccggc
ctggaccaggaatggccgggcggaacgtcaaagggcgaggggctggtgccttcgcgattt
ggtggggacattttccccattccgactggaacgacgggccggggcaacatcgccaatggc
ggtggtggcggcgtgtgtcacaactcgggcggcggtggtggcagcaacgcgggcgcgggt
ggcattggcgggcggacctgggtgggagaagagcctccggcgtcccggcccgttggtggg
cttgggggcgcttccctgaccttcgatccggtggtccggacggtgtttggcggtggtggc
ggtgctggacatggcaacgacgatgcggccggtggcggcagcgcgggcggcggtgtcgtg
ttcattcgcgccgcctcgctcgcgggcgctggccgcgtgtcggcgaacgggctcgcggga
ggcgacgccgtgggcactgccaacgatgccgcgggtggcgcgggcgctggcggtaccgtg
tacctgcgtgtcaccggagcactgagctgctcggccaactcggtgacggcccttggtggc
aatggtggccgcacgacgtacgaccagcatggaacgggtggcggcggtggtggcggccgt
ctgctgattcagggcgcgacggtcgggtgcactccggtcgtcaccggtggagcggccggc
acgcagccgacggccaacgcgccggacgggctcacgtatggcgccgaccccggaagcccg
ggtgtcgtcaccgtcctgccgggcgccttccccgcgtccctggcctcgccagtggtaacg
atgcccgccaatggctccatcacgggcatgcgtccggtcatcagcggcacggcgccgccg
aacgccaccgtggtcatcttcgtagacggagttgagctgggccgggtgccggcggatgcc
atgggcaacttcagcctcacgccaagcgccgacctgtccgtcggcgcgcacatcgtgaat
gcctacgccacgctccagggcgtcgcgtccgtgctgagcaacaccaacacgttcaccgtg
gcctccgataccactccgccggacaccaccatcgtgagtggccccccggcggtgaccaac
gccacgagcgccacgttcagcttcgcttccaacgagaacccggtgacgtacgagtgctcg
ctaaacggtggcccgttcgtggcgtgcaccaacccgcagaccttccccggcctgggtgag
ggcaaccacacgctggcagtgcgcgcccgcgacgcggcgggcaacctggacccgacgcct
gcgacgtatgcgtggacggtggacacgacggctccggacaccaccatcgtcagcggcccg
tcggggacgacgacgtccaacagcgccacgttcgacttcggctccaacgagaacccggtg
acgtatgagtgctcgctggacggtgcgccctacgtggcgtgcacggacccgcagacgttc
gtgagtctctcggacggggagcacacgctggcggtgcgcgcggtggacgcggcgggcaac
gaggacccgacgcccgcgacgcgcacctggaccgtggacgccacggcgccggacaccacc
atcgtgagcgggccccctgcggtgacgagttccaccagcgctacgttcgacttcagctcc
aatgagagcccggtgacgtacgagtgctcgctggacggtgcgcccttcgcggcgtgcgcc
gacccgcaaaccttccccggcctgggcgagggcaaccacacgctggcggtgcgtgcggtg
gacgcggcgggcaatctggactcgacgcctgcgacgtatgcgtggacggtggacacgacg
gctccggacaccaccatcgtcagcggcccgtcggggacgacgacgtccaacagcgccacg
ttcgacttcggctccaacgagaacccggtgacgtatgagtgctcgctggacggtgcgccc
tacgtggcgtgcacggacccgcagacgttcgtgagtctctcggacggggagcacacgctg
gcggtgcgcgcggtggacgcggcgggcaacgaggacccgacgcccgcgacgcgcacctgg
accgtggacgccacggcgccggacaccaccatcgtgagcgggccccctgcggtgacgagt
tccaccagcgctacgttcgacttcagctccaatgagagcccggtgacgtacgagtgctcg
ctggacggtgcgcccttcgcggcgtgcgtggacccgcaggtcttcccgagcgtgagcgaa
ggtgaccacaccttgcgggtgcgcgcggtggacggggccggaaacgtggacccgacgccc
gctgagtacgcatggacggtggacctgacgcctcctgagctgccgaccatcgaatcgcct
gcggaccaggaagaggtcgcgacggcgacgccgacgctgacgggaacgggggagccgggc
accgacatctacctggaagtgggcggcgccacgcacggccccatccccgtcgatgaggac
ggcaactggaccttcaccgtgcccgagccgctcgaagaggggccgcacacggtgtccatc
accggcgtcgacgccgcgggcaactccgcggggccggtgacgagcacgttcatcgtcgac
ctgacggcgcccgacacgttcatcgagtcgggccctgcgctggtgacgaatgcgacgacg
gccaccttcgacctccgctcggagggcggcggtgtcgcctacgagtgcagcctggatgcg
ggcgccttcgttccctgcgacaaccccgcgagcttcacgggtgtgccggatggcgaccac
ctgctcctggtccgtgcggtcgacgcggcgggcaacgtggacccgacccccgcccagtac
gcgtggacggtggacacggcggctccggatacgctcgtcgcgagcggcccggcgacgccg
acctcggagacgtcggccaccttcgtgttcgcggcctccgagcccggcgccacctacgag
tgcagcgtggatggcgcgggctgggtgccgtgcacggagacgtcgacgttcgagggcttc
tccgacggagaccacacgctcctggtgcgcgcggtggaccccgcgggcaacacggacccg
tcgcccgccgagtacacgtggacggtggacaccgcgccgccggcggcgccgctcatcacc
tcacccgcggacggcgcggtgctggatgacggcgtggtgaccatcacgggcactgcggag
ggggccgagtccgtcatgctgacggtgggcgggacgacctacggccccatcccggtcgag
ccctcgggcaactggaccttcacgccgccggtgacgctgccggatgggccttacacggtc
actgtcacggcgacggacgaggcgggcaacaccagcgccccgacgagctccgggttcacg
gtggacacgacggcgccggacacggccatcgacagcgggccggcggtgctgacgaacgtg
gccatcgcggacttcgtcttctcctccaatgagagcccggtgacgtacgagtgctcgctg
gacggtgcgcccttcgcggcgtgcccggcccaggcgcagttcggcccgctgggcgacggc
gagcacaccctgcgggtgcgcgcggtggacgcggcgggcaatgtggacccgtcgcccgcc
gagcacacgtggaccgtggacgccacggcgcccggggtgagcatcaccacgcccgcgaac
ggcgaggtgctcgacgtcgcggtggtgacgtacacgggaacgacggagccgggcagcacc
gtgacggtggtggtggatggagtcacggtgggcacggccgaggcggatgacgccggtaac
tggtcgctccccgtgggggacacgctctcggagggctcccacacggtgtccgccaccgcc
gtggacgaggcgggcaacaccggctccacggtgacgcacacgttcaccgtggacgcgcag
ccgcccgagacgacgttcatcacgatgccgccggcgctctccaacagcgactcggcgacg
ttcaccttcgattccgacgagtccccggtgacgtacgagtgcagcctggatggcgcgccc
ttcgcggcgtgcccggacccggccaccttctcgggcctcgacgacggcgagcacacgctc
gaggtccgggcgcgggacgccgacggcaacgtggacccgacgccggccagctacacgtgg
acggtggacaccaccgcgccggagacgctcatcctgtcggggccgccgctgacggaggcg
cctgccacggcgacgttcgacttcgactcggatacctctccggtgacgtacgagtgctcg
ctggacggtgcgccctatgcgccgtgcacggacccggtcaccttcaccggcctggcggaa
ggcgaccacaccttgtcggtgcgggcggtggacgaggccggcaacgtggatgacacgccg
gccacctactcgtgggtggtggcgaacgacacggacggcgacgggctgtcggacaccgag
gaggtcgcgcggggcaccgacccgaacaaccccgacacggacggtgacgggctgccggac
ggtatcgaggtgaacgtcgccgggacggacccgctggatgacgactcggatgatgacggc
atcctggacggcaacgaggacgccaaccacaacggcatcgtcgacgagcgcgagacggac
ccgaacaactgggacacggacggtgacctgctctccgacggtctggagacgggcctcgcc
gagccccagggcaccggtacggacctgacgcgcttcgtggcggatgcggacccgacgacg
acgacggacccgctcaaccccgatacggacggcggcagcgtgcgcgacggcatcgaggac
gccaaccagaacggccgcgtcgacccgggcgagacggatccgctgctcgccgcggatgac
gtcgacacggatggtgacggcatcgacgacgccaccgaaatcgcgctgggcctggacccc
aatgacgcggacagcgacgacgacggtgtgccggacggcgtggacggcatcaccgacacg
gacgatgacggcctcatcgacgcgctggacccggacagcgacaacgacggcatcctggac
ggcacggagttgggcgtgacgctggagagcgctccggcggacaccgaccgtagctcgccc
aacttccagccggacgcggacccgagcaccaccaccgacccgaagcatccggacacggac
ggtgacgggctgcccgacggcgaggaggacgccaaccacgacggccgcgtcgacaccacg
gagaccgaccccaacaacccggacacggatgacgacggcctgagcgacggcgtggaagtg
gggggcgccaaccccacgaacccgctcaaccccgacacggacggcgatggcctgacggac
ggtgtggaggacgccaaccacaacggcgccttcgacaacggcgagacggacccgaacaac
gaggacacggacgcgggcggcgtgaacgatggtgaggaggtcaccggcggcaccgacccg
ctggacggcaacgacgacttcgtcatctccggccgtggctgcagcacgagcggggcgggc
accttcgctccgctggcgctgctgctcctcgggctgcccctgctgggccgcttccgccgc
acggcggggcgggccggcgctttcccgggcgtggccgcggcggtgctcgcgctggcgggc
atgctggtggcgcagccggcctcggcgcaggtgcaggctccgtccgcgtcgcagtccatc
gacgtgcagcagtacaagccggggcccagctcgaaggacatcctgggcgtccagagcgcc
caggtgcaccgccacctcggctggaacgtgggggtgtccgtcaactacgcggacaagccg
ctcaacttcatggacccgcgcacggaccggttcatcacggccctggtccgcagccaggtg
ggtgtggacctgatgggctcggtgggcctcttcgaccgcttcgagctcggcgtgctgctg
ccggtgacgctgcagcgctcacaggcggcgcccatggtggacccgtccttcgcgcagggc
gtgggctcgggtggcatcggcgacctgcggctggtgcccaaggcccggctgctggaggag
ggcgccttcggcctggcgctgacggtgccggtggtgctgcccacgggcgggggctcggac
ttcctcggtggctccggcgtgggcgtgcagccgcgcctcgtggccgagtacggcgagcgg
ttccgcctggccgccaacgtgggcgtggacttccggaagcagcagcagctgcgcaacctg
aacatcggcaacgcggtgtcctatggcgtgggcgccgagctgcccttcaccgtgagcgag
gtgccgctggcgctcgcggccacggtggtgggcgcggtgggcctggagcagcagaacacc
gaagagcgtccgctggagctgctggcggcgctgaagtaccgctccctgggcggcttctcc
gcgcacgtgggcggcggcccgggcctcacgcgcggctacggcacgccgggcttccggctg
ctcgcgggcttcagctacagcccggagccgtcgcgcgagccggtgcaggccgcgccggtg
gacacggatggcgacggcctggtggacctcgatgaccgctgcccgacggagcccgaggac
aaggacggcttccaggacgaggacggctgccccgacccggacaacgacgcggacggcatc
gtcgacacggcggacgcgtgcccgaacgagcccgagacggccaacggcttcgaggacacg
gatggctgcccggacaccgcgccgcctccgcccccggtggacacggatggcgacggcctc
atggacccggacgatcgctgccccaacgaaccggaggacaaggacggcttccaggacgag
gacggctgccccgacccggacaatgaccgggacggcatcccggacaccgtggaccagtgc
ccgaacgagccggagaccatcaacggcgtcaaggacgaggacggctgccccgacaagggc
aaggtgaaggtgcaggtcgagggcgagcgcatcgtcatcctggagaaggtgtatttcgcc
accggcaaggacgtcatcctggcccgctcgttcccgctgctgaagcaggtggccgcggtg
ctgcgcgccaacacgcaggtggagctggtccgcatcgagggccacacggacagccagggc
aacgacgcgaggaacctggacctgtcccagcgccgcgccaacaacgtgcgtgccttcctg
gtgaaggagggcatcgccgagagccgcatggaggcggtgggctacggcgagacgaagccg
gtggacaccaacaagacggcgaagggccgcgagaacaaccgccgcgtggagttcaccatc
gtccgcatcgcgaaggtggaggtggagcgcgaggcgcactga
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integrated database retrieval system
