Pseudomyxococcus flavus: VZL07_04425
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Entry
VZL07_04425 CDS
T11142
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pfly Pseudomyxococcus flavus
Pathway
pfly00470
D-Amino acid metabolism
pfly00550
Peptidoglycan biosynthesis
pfly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VZL07_04425 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VZL07_04425 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfly01011
]
VZL07_04425 (murD)
Enzymes [BR:
pfly01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VZL07_04425 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfly01011
]
Precursor biosynthesis
Amino acid ligase
VZL07_04425 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_7
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
XSE97165
LinkDB
All DBs
Position
complement(1091226..1092593)
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AA seq
455 aa
AA seq
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MTLALSGQKVLVFGLAKSGVAALRLLRQHGAHVTALDARSEDALGAVAHEVKSLGATLVS
GPTPAGLLASQDLVVVSPGVPLALPEIQAARAAGVAVWGEVELAGRLLADVPLFGITGTN
GKSTTTALTGALFSSGGKRTFVGGNLGRPFSEAAMPPGEWDALVVELSSYQLEGIRTLRP
RGAAILNLTPDHIDRYPSHAAYGEAKARIFQNQQAGDFAVVNADDADVLGLARGAKAPVY
GFSLTGRPVAQAPALAGLAVVEPGGFRLDFLGEHYTLTNRALRGAHNAQNAMAAALLARL
GGVPSGAVQAGLDGYPGLPHRLESVRTLDGVEWVNDSKATNVESVLVALRAFTTGVWLIA
GGKGKGAPYAPMVEAGRGKVKGVLTMGDDADTLARAYAGAADVYACGTLAQAVARARELA
APGDTVLLSPACASFDQFKNFEDRGDSFKRLVEAL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacgttggcgctgtccggtcagaaggtgctggtgttcgggctcgcgaagagcggcgtg
gccgcgctgcgcctgctgcgtcagcacggcgcgcacgtcacggcgttggacgcgcggagc
gaggacgcgctgggcgcggtggcgcacgaggtgaagtcgctgggcgccacgctggtgtcg
ggacccacgccggcggggctgctcgcgtcacaggacctggtggtggtgagcccgggcgtg
ccgctggcgctgccggaaatccaggccgcgcgcgcggcgggcgtggcggtgtggggcgag
gtggagctggccggccgcctgctggccgacgtcccgctgttcggcatcaccggcaccaac
ggcaagagcaccaccacggcgctcaccggcgcgctcttctccagcggcggcaagcgtacc
ttcgtgggcggaaacctgggccggcccttcagcgaggcggccatgcctccgggtgaatgg
gacgcgctggtggtggagctgtccagctaccagctggagggcatccgcacgctgcgtccc
cggggcgcggccattctcaatctcacgccggaccacatcgaccgctacccgagccacgcg
gcgtacggtgaggcgaaggcgcgcatcttccagaatcagcaggccggtgacttcgcggtg
gtgaacgcggacgacgcggacgtgctgggcctggcgcgcggcgcgaaggcgccggtgtac
ggcttcagcctcacgggcaggcccgtggcgcaggcgccggccctggcgggcctggcggtg
gtggagccgggcggcttccggctggacttcctgggtgagcactacacgctgacgaaccgc
gcgctgcgcggcgcgcacaacgcgcagaacgcgatggcggcggcgctgctggcgcggctg
ggcggcgtgccctcgggcgcggtgcaggcggggctggacggctacccgggcctgccgcac
cggctggagagcgtgcgcacgctggacggcgtcgagtgggtgaacgactcgaaggccacc
aacgtggagtcggtgctggtggcgctgcgcgcgtttaccactggcgtgtggctgattgcc
ggcggcaagggcaagggcgcgccgtacgcgcccatggtggaggcggggcggggcaaggtg
aagggcgtgctcaccatgggcgacgatgcggacacgctggcccgggcctacgcgggcgcg
gcggacgtgtacgcgtgtggcacgctggcccaggcggtggcgcgagcgcgcgagctggcg
gcccccggagacacggtgctgctgtcgcccgcgtgcgcgtccttcgaccagttcaagaac
ttcgaagaccggggcgattcgttcaagcgcctcgtggaggcgctgtga
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