Pseudomyxococcus flavus: VZL07_04600
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Entry
VZL07_04600 CDS
T11142
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
pfly Pseudomyxococcus flavus
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfly03032
]
VZL07_04600
03036 Chromosome and associated proteins [BR:
pfly03036
]
VZL07_04600
03400 DNA repair and recombination proteins [BR:
pfly03400
]
VZL07_04600
DNA replication proteins [BR:
pfly03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VZL07_04600
Chromosome and associated proteins [BR:
pfly03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
VZL07_04600
DNA repair and recombination proteins [BR:
pfly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
VZL07_04600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XSE97199
LinkDB
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Position
1131980..1132333
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AA seq
117 aa
AA seq
DB search
MLKSDLINILVAKRGVTQKQAEATIETIFESMKDALCRGENIEIRGLGAFHVKNYQGYQG
RNPKTGQVIPVKPKRGLLFRTGKELRDRVNRPAPQQAQTDLPSLPESKGPGNTGTGL
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtccgatctgatcaacatcctcgtcgccaagcggggcgtgacgcagaagcag
gctgaggccaccatcgagacgattttcgagtcgatgaaggatgccctctgccgcggcgag
aacatcgagattcgcgggctgggtgcctttcacgtgaagaactaccagggctaccagggc
cgcaatccgaagacgggccaggtcatcccggtgaagcccaagcgcggcctgctcttccgc
accggcaaggagctccgggaccgcgtcaaccgcccggcgccgcagcaggcccagacggac
ctgccctcgctccccgagagcaagggccctgggaacacgggcaccgggctctga
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integrated database retrieval system
