Pseudomyxococcus flavus: VZL07_05305
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Entry
VZL07_05305 CDS
T11142
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pfly Pseudomyxococcus flavus
Pathway
pfly02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VZL07_05305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfly02022
]
VZL07_05305
02035 Bacterial motility proteins [BR:
pfly02035
]
VZL07_05305
Two-component system [BR:
pfly02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
VZL07_05305
Bacterial motility proteins [BR:
pfly02035
]
Pilus system
Twitching motility proteins
VZL07_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
AAA
DUF2773
AAA_3
Peripla_BP_4
AAA_22
TIP49
Motif
Other DBs
NCBI-ProteinID:
XSE97335
LinkDB
All DBs
Position
complement(1281803..1283239)
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AA seq
478 aa
AA seq
DB search
MTSAQGGELGTRGHILVVDDELSMREYLELLLQREGYTVTSVAGVKSACDVLAQDGVDLV
ISDLKLGTGSGLDVLRAARARPASPEVVLITAYGTPAAAVEAMREGAYDYICKPFDNEEM
RLLVQKALEKRSLRQENSGLRARLFPGLDGAVGQSARMQAVWELVEKVASGRSTVLVTGE
SGTGKELVGRAIHMRGSRAARPFLPFNCAALNEGTLESELFGHVKGAFTGATTDRSGLLV
AAGDGTVMLDEVGEMPLATQVKLLRVLQERRVKPVGSAAEIPFQARVIAATNRRLEAEVK
AGRFREDLFYRLNVITIELPPLRERAGDISLLANYFLSRMAEELGRPGLRFAPETLALLE
RYPFPGNVRQLQNMVERAATLSDSDLLGPSTLPPAVRGDSDPAARTPEGSEPGLGAGFNL
ERHLDESERRYLVAAMKQAGGVKTRAAELLGLSFRSFRYRLAKHGLTDDLEPGGTLDA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcggctcagggaggggagttggggacgcgtggccacattctcgtggtcgatgac
gagctgtccatgcgcgagtaccttgagctgttgctccagcgagagggctacacggtcacg
agcgtcgcgggcgtgaagagcgcgtgcgatgtgctggcccaggacggggtggacctggtc
atctccgacttgaagctggggaccggtagtggcctcgatgtgctgcgcgcagccagggcc
cggcccgcctctccggaagtggtgctcatcaccgcgtacggcactcccgccgccgccgtg
gaggcgatgcgcgaaggcgcgtacgactacatctgcaagcccttcgacaacgaggagatg
cggctgctggtccagaaggccttggagaagcgctcgcttcgacaggagaacagtggcctc
agggcgcgcctgtttcctggcctggatggggccgtggggcagagcgctcggatgcaggcg
gtctgggagctggtggagaaggtggcctccgggcggagcaccgtgctggtgacgggcgag
agcgggacgggaaaggaactggtggggcgcgccatccacatgcgcggcagccgggccgcg
cgaccgttcctgcccttcaactgcgccgcgctgaatgaaggaacgctggagagcgagctc
ttcgggcatgtgaagggcgccttcaccggggcaaccacggaccgttcggggctcctcgtg
gcggcgggtgacggcaccgtcatgctggatgaggtgggggagatgccgctcgccacgcag
gtgaagctgctccgtgtgctccaggagcgcagggtgaagccggtgggcagcgccgcggag
attccgtttcaggcacgcgtcatcgcggcgaccaatcggcggcttgaagccgaggtgaag
gccggtcgcttccgtgaggacctcttttaccgactcaacgtgattaccatcgagctgccg
cctctgcgggagcgcgccggtgacatctcgttgctggcgaactacttcctgtcacggatg
gcggaggagttggggcggcccggcctgcgcttcgcgcccgagactctggcgctgctggag
cgctatccgttcccgggcaacgtgcgacagctgcagaacatggtggagcgggccgcgacc
ctgtccgattcggacctcctgggaccgtccacgctccctccagccgtgaggggtgattca
gaccccgctgcgcggacccctgaaggaagcgaaccgggattgggcgcgggcttcaacctg
gagcggcatctcgatgagagcgagcgccgttatctggtggcggcgatgaagcaggcgggg
ggcgtgaagacccgtgctgcggagctcctgggcctttcattccggtccttccgctatcgg
ctggccaagcacgggctcaccgatgacctagagccaggaggcacgctggatgcgtaa
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