Pseudomyxococcus flavus: VZL07_16100
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Entry
VZL07_16100 CDS
T11142
Name
(GenBank) RimK family alpha-L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
pfly Pseudomyxococcus flavus
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfly03009
]
VZL07_16100
Ribosome biogenesis [BR:
pfly03009
]
Prokaryotic type
ribosomal protein modification factors
VZL07_16100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
Dala_Dala_lig_C
LysX_preATP_grasp
ATPgrasp_Ter
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
XSE99407
LinkDB
All DBs
Position
complement(3855430..3856419)
Genome browser
AA seq
329 aa
AA seq
DB search
MPSRKVKPKKAPALPGPQAPEHPERPPRRGRAKRTVVVLSRKRSLYSTRRLVAAIRERGH
RPLVLDTLRCCLLLAQDAPRMTYRGVEVRGVDVVVPRIGASITAYGLAVVNHFEMMGVPV
LNPPTSIARSRDKLRALQYLSRSGLDIPRTVMAHDRSNVRRLVEEVNGLPVIIKLIKGTQ
GVGVMIAHTLPEVQTILDTFWDLGQEIVLQEFVAESEGRDVRALVVGDRVVGAMRRKAKT
GEFRSNIHRGGEGQAIELSSQYVEAAVRAARIVGLEVAGVDMLEGRAGPRLMEINSSPGF
EGLERATGRDIAGAIVDHALAYAAAKRTG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgcgaaaagtgaagccgaagaaggccccggccctgcccgggccccaggcaccc
gagcatcccgagcggcccccgcgccgagggcgtgcgaagcggacggtggtcgtcctgtcg
cgcaagcgctccctgtattcgacgcggcggctggtggccgccatccgcgagcggggccac
cgcccgctggtgctggacacgctgcgttgctgcctcctgctcgcgcaagacgcaccgcgc
atgacgtaccgcggtgtggaggtgcgcggcgtggacgtggtggtgccgcgcatcggcgcg
tccatcaccgcctacgggctcgcggtggtgaaccacttcgagatgatgggcgtgccggtg
ctcaacccgcccacgtccatcgcgcgcagccgcgacaagctgcgcgccctgcagtacctg
tcgcgctccgggctggacatccctcgcaccgtcatggcgcacgaccgcagcaacgtgcgc
cggctggtggaggaggtcaacggactgcccgtcatcatcaagctcatcaaggggacccag
ggcgtgggcgtgatgattgcccacacgctgccggaggtgcagaccatcctcgacaccttc
tgggacctggggcaggaaatcgtgctccaggagttcgtcgcggagagcgagggacgggac
gtgcgggcgctcgtggtgggcgaccgcgtggtgggcgccatgcgccgcaaggcgaagacg
ggcgagttccgctccaacatccaccgcggcggcgaagggcaggccatcgagctgtcctcg
cagtacgtggaagccgctgtgcgggccgcacgcatcgtgggcctggaggtcgcgggcgtg
gacatgctggagggccgcgcgggcccccggctgatggaaatcaactccagccccggcttc
gagggcctggagcgcgccaccggcagggacatcgcgggggccatcgtcgaccacgcgctg
gcatatgccgcggcgaagcgcaccgggtga
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