Pseudomyxococcus flavus: VZL07_21640
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Entry
VZL07_21640 CDS
T11142
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfly Pseudomyxococcus flavus
Pathway
pfly02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VZL07_21640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfly03021
]
VZL07_21640
Transcription machinery [BR:
pfly03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VZL07_21640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Rv2175c_wHTH
Sigma70_r2
Taeniidae_ag
Motif
Other DBs
NCBI-ProteinID:
XSF00233
LinkDB
All DBs
Position
complement(5186487..5187122)
Genome browser
AA seq
211 aa
AA seq
DB search
MQGLRMTTLRLSKEADEPAEAPAPGGDEALLSRRALAGDRAAWDALVARHHRRVVVSLLA
RGVRVDRAQELAQETWARLIQQQQRGLLTELRLPNLALTQAAFLAADDARRARRESIAGA
VDELPERHHPVDPSVSAERRLLSEEQLSRAHAALAQVSPSARNVFLLACDGQELPHSEVA
SRVGLSVQRVRQILCEVRKKLRTALEEETHA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgcagggcctgcggatgacgacgctgcgactgtcaaaggaagccgatgagccagccgaa
gcgcccgcgccgggaggggacgaagccctcctctcgcggcgggcgctggcgggcgacagg
gctgcctgggacgcgttggtggcacgccatcaccggcgcgtcgtggtatcgctgctggct
cgtggcgtccgggtggaccgggcgcaggagctggcgcaggagacctgggcgcggctcatt
cagcaacagcagcgtgggctgctgacggagctgcgtctgcccaacctcgccctcacccag
gcggccttcctggccgctgacgacgcacgacgggcacgccgcgagtccatcgccggcgcg
gtggacgagctgcccgaacgccaccacccggtggacccctcggtgtccgcggagcggcgc
ctgctctccgaggagcagctgtcgcgcgcccatgccgcgctggcgcaggtgtcgcccagc
gcacgaaacgtcttcctcctggcctgtgacgggcaggagcttccccattccgaagtcgcc
tcgcgcgtcggcctctcggtccagcgcgtgcggcagatcctgtgcgaggtccgcaagaag
ctgcgcaccgcgctcgaggaggaaacccatgcttaa
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integrated database retrieval system
