Pseudomyxococcus flavus: VZL07_22170
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Entry
VZL07_22170 CDS
T11142
Name
(GenBank) ribonuclease H-like domain-containing protein
KO
K02319
DNA polymerase, archaea type [EC:
2.7.7.7
]
Organism
pfly Pseudomyxococcus flavus
Pathway
pfly03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VZL07_22170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfly03032
]
VZL07_22170
Enzymes [BR:
pfly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VZL07_22170
DNA replication proteins [BR:
pfly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
B-family DNA polymerases
VZL07_22170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H_2
DNA_pol_B
DNA_pol_B_exo1
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
XSE93127
LinkDB
All DBs
Position
5334219..5336624
Genome browser
AA seq
801 aa
AA seq
DB search
MEDEWLWGWDPTPGIVSVWAEPDGRAFVWRRIPKTGALVREDVRFRPWLLLASLEDLGHL
GPRLRPESEGPARHRVTWQELEGPGALRYLVRADDGRALAGAVLEGASRRLGRPVGHLKE
LGANAVLALPPEEQYLTTSGRTYFRDLAFDELRRMQFDLETTGLDPSHHRVFLVALRSPD
GETETLEAQGDDDSAEADLLYHLAERVRAWDPDVIENHNLHGFDLPFLARRARHLGVSLA
LGRAGAPGLRHRPSARGAALGRPVPGAPPDAMRRARYTVPGRELIDTLDAVLRHDFSTRD
LPGHGLKAVARHLGIAGPEREHIPGARVYEVFRTDPERVRRYARDDVKEAAGLARLLGGA
AFALARMAPRRYERLADAGPATGVLDPLLVRAYLREGAALPTHEEGDGTSHSGAALHLFA
SGVARRIVKADVASLYPSLMRQYRIGPSRDRLGVLLALVDRLVDQRLAAKGRARAAPVGS
QERFTNEALSAAMKIVVNSAYGYLGAVGLTRFSDVHAANEVTRQGREVLGLLCRELARRG
VTLLEADTDGVYFAVPEGWQEADERRVVAEVAALLPPRVQLEFDGRYAAMLSHEPKNYAL
QPYDGPLVLRGVAFRSSRAEPFGEAFLRRALRCLLAGDIPGVRDVYVSTVMALRRRALPT
PEVCAQVRLTKTGAQYLAIRSRRRELPYEAMLASGRSDWPVGEQVRVYRANGGRAGLLPV
PETDDVGTSRPLTREEDPRDYDVEYYVRLLRETFAARLVRALTPEDFRTVFDDPGQPSLF
APSLAEAKPILTVLMGPGGPE
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagtggctctgggggtgggaccccacgccgggcatcgtctccgtgtgggcg
gagccggatggccgcgccttcgtgtggcgccgcatcccgaagacgggggcgctcgtgcga
gaggacgtgcgcttccgcccgtggctgctgctcgcgtcgctggaggacctggggcacctg
ggccctcggctgcgcccggagtcggaggggcccgcgcgccaccgcgtgacatggcaggag
ctcgaagggcctggagcgcttcggtacctggtccgcgcggacgacggccgggccctggcg
ggcgccgtgctcgaaggcgcgtcgcgccggctcggccgcccggtggggcacctgaaggag
ctgggggcgaacgcggtgctcgcgctgccaccggaggagcagtacctcaccacctccggc
cgcacctacttccgcgacctcgccttcgacgagctgcgccgcatgcagttcgacctggag
accaccggactggacccatcgcaccaccgcgtcttcctcgtggcgctccggagcccggac
ggggagacggagacgctcgaagcgcagggggatgacgactcggcggaggcggacctcctc
taccacctggcggagcgcgtgcgcgcgtgggaccccgacgtcatcgagaaccacaacctg
cacggcttcgacctgcccttcctcgcccggcgcgccaggcacctgggcgtgtcgctggcg
ctgggccgtgcgggcgcacccggcttgcgccaccggccctccgcgcgaggcgccgcgctc
gggcgcccggtgcccggtgcgccgccggatgcgatgcgccgcgcccgctacacggtgccc
ggacgcgagctcatcgacacgctggacgcggtgctgcggcacgacttctccacccgggac
ctgccgggccatggcctcaaggccgtcgccaggcacctggggattgcggggccggagcgc
gagcacatccctggcgcccgggtgtacgaggtcttccgcacggacccggagcgcgtgcgg
cgctatgcgcgcgacgacgtgaaggaagcggccgggctcgcgcggctcctcggcggcgcg
gccttcgcgctcgcgcgcatggcgccccgccgctacgagcggctcgcggacgcggggccg
gccaccggcgtgctggacccgctgctcgtccgggcctacctccgggagggcgcggcgctt
cccacgcatgaagaaggggacggcacgtcgcacagcggcgcggcgctccacctgttcgcc
agcggggtggcccggcgcatcgtgaaggcggacgtcgccagcctgtatccctcgctcatg
cgccagtaccggattggccccagccgcgaccggctgggcgtgctgctggcgctggtggac
cggctggtggaccagcggctggcggcgaagggccgggcgcgcgccgcgcccgtgggctcg
caggagcgcttcacgaacgaggccctgtccgcggcgatgaaaatcgtcgtcaactcggcc
tacggctatctgggcgcggtggggctcacgcgcttctcggacgtgcacgccgccaacgag
gtcacgcgtcagggccgcgaggtgctgggcctgctgtgccgggagctggcgcgccgcggc
gtcacgctgctggaggcggacacggacggggtgtacttcgccgtgccggaaggctggcag
gaggccgatgagcgccgtgtcgtcgcggaggtcgccgcgctcctgccgccccgggtgcag
ctggagttcgacgggcgctacgccgcgatgctgtcgcacgaaccgaagaactacgcgctc
caaccgtatgacggaccgctggtgctgcgcggcgtggccttccgctccagccgcgcggag
ccctttggtgaggccttcctgcgccgcgcgctgcgctgtctgctggcgggcgacatcccg
ggcgtccgcgacgtgtacgtctccacggtgatggccctgcgccgcagggcgctgcccacg
ccggaggtctgcgcccaggtgcggctgacgaagacgggcgcgcagtacctcgccatccgc
tcgcgccgccgggagctgccctacgaggccatgctggcgagcgggcgcagcgactggccc
gtgggagagcaggtccgcgtctaccgggcgaacggaggccgcgcgggcctgcttcccgtc
ccggagacggacgacgtggggacgtcccggccactcacgcgcgaggaggacccgcgcgac
tacgacgtcgagtactacgtgcggctgttgcgggagacgttcgccgcccggctggtgcgc
gcgctgacgcccgaggacttccggacggtgttcgacgacccgggacagccctcgctcttc
gccccctcgctcgcggaggcgaagcccatcctcacggtgctgatggggcctggcggcccg
gagtag
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