Pseudomyxococcus flavus: VZL07_26530
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Entry
VZL07_26530 CDS
T11142
Name
(GenBank) pyridoxal-dependent decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pfly Pseudomyxococcus flavus
Pathway
pfly00300
Lysine biosynthesis
pfly00470
D-Amino acid metabolism
pfly01100
Metabolic pathways
pfly01110
Biosynthesis of secondary metabolites
pfly01120
Microbial metabolism in diverse environments
pfly01230
Biosynthesis of amino acids
Module
pfly_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VZL07_26530
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VZL07_26530
Enzymes [BR:
pfly01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VZL07_26530
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
XSE93946
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All DBs
Position
complement(6325336..6326778)
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AA seq
480 aa
AA seq
DB search
MSLKSRLLGTAKRQVKQTLRPVLQRAMTPARTAIPASHWGLQELPGQGLSLEGVPLAGLV
ERWGSPLHVVHLAALRRNAERFLAVPPGRTGGCEVYYSYKTNPVPGVLSFLHGLGVGAEV
ISAYELWLALKLGVPPERIVYNGPVKSEASVREAISRGIQLLAANHAEEIAVFARLAAEL
DRRPRVAVRVSTNSGWSAQFGTPITGGAALRAYQQARASRHLDVVGLHAHRGETIRTEGD
LTSFVEAVLDFTDTLHQELGLDLEVLDLGGSLNTPTVEHIAERDWRLNLTFFRDVPAPDP
AASLSIERYVALAVEMVESHYARRGRQRPRIFLEPGRAMTGDTQLLLGRVHALKAGEDRT
WAVLDAGINHAECVRNEYHQLFHVNRPDAPADKVYTVVGPICTPGDTLYHAKRLPALRVG
DTLAIMDAGAYFVPFATSFSYPQPAIIALEDGQERLLRRAETFDDLVTFDENVDRAALTG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcaagagccggctgctggggacggccaagcgtcaggtgaagcagacgctgcgc
ccggtgctccagcgggcgatgacgcccgcgcgcaccgccattcccgcctcccactggggc
ctccaggagctgcccggccagggcctgagcctggaaggcgtgccgctggcggggctcgtg
gagcgctggggctcgccgctgcacgtggtgcacctggcggcgctgcgccgaaacgcggag
cgcttcctcgcggtgccgccggggcgcaccggcggctgtgaagtctattactcgtacaag
acgaacccggtgccgggggtgctgtccttcctgcacggcctgggcgtgggcgcggaggtc
atctccgcctacgagctgtggctggcactgaagctgggcgtgccgcccgagcgcatcgtc
tacaacggcccggtgaagtccgaggcctcggttcgcgaggccatctcccggggcatccag
ctgctcgccgccaaccacgcggaggagattgccgtcttcgcccggctcgccgcggagctg
gaccgccgcccgcgcgtcgcggtgcgggtgagcacgaacagcggctggtccgcgcagttc
ggcacgcccatcaccggtggcgccgcgctgcgggcgtaccagcaggcgcgcgcctcgcgg
cacctggacgtggtgggcctgcacgcgcaccgaggggagaccatccgcaccgaaggcgac
ctcacgtccttcgtggaggcggtgctcgacttcacggacacgctgcaccaggagctgggc
ctggacctggaggtgctcgacctgggcggcagcctcaacacgcccaccgtcgaacacatc
gccgagcgcgactggcgcctcaacctcaccttctttcgcgacgtgcccgcgcccgacccg
gcggcgtcgctgtccatcgagcgctacgtggcgctggcggtggagatggtggagtcgcac
tacgcgcgccgcggccgccagcgcccccgcatcttcctggagccgggccgagccatgacg
ggcgacacccagctgctcctgggccgcgtgcacgcgctcaaggcgggcgaggaccggacg
tgggcggtgctggacgccggcatcaaccatgccgagtgcgtgcgcaacgagtaccaccag
ctcttccatgtgaaccggccggacgcgcccgcggacaaggtctacacggtggtgggcccc
atctgcaccccgggcgacacgctctaccacgccaagcggctgccagcgctgcgggtgggt
gacacgctggccatcatggacgcgggcgcctacttcgtgcccttcgccacgtccttctcc
tatccccagccggccatcatcgcgctggaggatggccaggagcggctgctgcggcgcgcg
gagacattcgacgacctggtgacgttcgacgagaacgtcgaccgcgccgccctcaccggt
tga
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