Pseudomyxococcus flavus: VZL07_27495
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Entry
VZL07_27495 CDS
T11142
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfly Pseudomyxococcus flavus
Pathway
pfly00061
Fatty acid biosynthesis
pfly00071
Fatty acid degradation
pfly01100
Metabolic pathways
pfly01212
Fatty acid metabolism
pfly02024
Quorum sensing
pfly04146
Peroxisome
Module
pfly_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VZL07_27495
00071 Fatty acid degradation
VZL07_27495
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VZL07_27495
09145 Cellular community - prokaryotes
02024 Quorum sensing
VZL07_27495
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfly01004
]
VZL07_27495
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfly04147
]
VZL07_27495
Enzymes [BR:
pfly01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VZL07_27495
Lipid biosynthesis proteins [BR:
pfly01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VZL07_27495
Exosome [BR:
pfly04147
]
Exosomal proteins
Exosomal proteins of breast milk
VZL07_27495
Exosomal proteins of breast cancer cells
VZL07_27495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
gerPA
Motif
Other DBs
NCBI-ProteinID:
XSE94129
LinkDB
All DBs
Position
complement(6551755..6553569)
Genome browser
AA seq
604 aa
AA seq
DB search
MQLPQFQTLIDIFKRSTSTFGSRELFGEKKNGQWVWTTYSRFGEMVDDLRGGLAQLGVGA
GDRVAVISNNRLEWAVGAYATYTLGGAYVPMYESQQAKELQFILKDCGAKVVFCATDEIA
QRIQAVRAELPQLEHVIRFSGTASDADSFATLLRRGAETPTPLVSPKPTDLAGLIYTSGT
TGQPKGVMLSHSNIARNVSAMHEVFPMSTEDRSLAFLPWAHVFGQTVELHALFSMGASMA
IAEAVEKIIDNLSEVKPTLLFSVPRIFNRIYDGLQKRMAGEKAVTRFMFHRGLAVAAQRR
ALADQGKSSGLLDLQHAFFDKVVFSKVRARFGGRLKYAFSGGSAISKEVAEFIDNLGITV
YEGYGLTETSPIATANYPNHRKIGSVGKALPGVRVEIDTAATGDATQGEIVVHGHNVMMG
YYNKPEENEKVFTGNGGFRTGDMGYLDPDGYLYITGRIKEQYKLENGKYVVPSPIEQSLT
LSTYIANALVHGMNKPFNVAIIVVDVDALKKWATEKGLDTSSMPELLKRPEVQQLYREQV
NEFTRDVKGYERPQRFLLISEDFTVANDMLTPKMSVKRRNVVARYNDAIEALYREGSDRA
VSAA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcccgcagttccagacgctgatcgacatcttcaagcgcagcacctccaccttc
ggcagccgcgagctcttcggagagaagaagaacgggcaatgggtctggacgacctattcc
cgcttcggcgagatggttgacgacctgcgcggcggcctggcgcagctgggcgtgggtgcc
ggcgaccgcgtggccgtcatctccaacaaccgcctggagtgggcggtgggcgcgtacgcc
acgtacacgctgggcggcgcgtacgtgcccatgtacgagtcgcagcaggccaaggagctg
cagttcatcctgaaggactgtggcgccaaggtcgtgttctgcgccacggatgaaatcgcg
cagcgcatccaggcggtccgcgcggagctgccgcagctggagcacgtcatccgcttcagc
ggcaccgccagcgacgcggacagcttcgcgacgctgctgcggcggggcgccgagacgccc
acgcccctggtgagccccaagcccacggacctggccggcctcatctacacgtccggcacc
acgggccagcccaagggcgtgatgctcagccactcgaacatcgcccggaacgtgtcggcg
atgcacgaggtcttccccatgtcgacggaggaccgctccctggccttcctgccctgggcg
cacgtcttcggccagacggtggagctgcacgcgctgttctccatgggcgcgtccatggcc
atcgcggaggcggtggagaagatcatcgacaacctctccgaggtgaagcccacgctgctg
ttcagcgtgccgcgcatcttcaaccgcatctacgacggcctgcagaagcgcatggccggc
gagaaggcggtgacgcgcttcatgttccaccggggcctcgcggtggcggcccagcgtcgc
gcgctcgcggaccagggcaagtcgagcggcctgctcgacctccagcacgccttcttcgac
aaggtggtgttctccaaggtgcgcgcgcgcttcggcgggcggctgaagtacgccttctcg
ggtggctcggccatctccaaggaggtggcggagttcatcgacaacctcggcatcaccgtc
tacgagggctacggcctcacggagacgtcgcccatcgccacggccaactaccccaaccac
cggaagattggctcggtgggcaaggcgctgcccggcgtccgcgtggagattgacacggcc
gccaccggcgacgcgacgcagggcgagatcgtcgtccacggccacaacgtgatgatgggc
tactacaacaagcccgaggagaacgagaaggtcttcaccggcaacggcggcttccgcacc
ggtgacatgggctacctggacccggacggctacctctacatcaccggccgcatcaaggag
cagtacaagctggagaacggcaagtacgtggtgcccagccccatcgagcagtcgctgacg
ctgtccacctacatcgccaacgccctggtccacggcatgaacaagccgttcaacgtggcc
atcatcgtcgtggacgtggacgcgctgaagaagtgggccacggagaagggcctcgacacg
agctcgatgccggagctgctcaagcgccccgaggtgcagcaactctaccgtgagcaggtg
aacgagttcacccgcgacgtgaagggctacgagcggccgcagcgcttcttgctcatcagc
gaggacttcacggtggccaacgacatgctcaccccgaagatgagcgtgaagcgccgcaac
gtcgtggcgcgctacaacgacgccatcgaggccctctaccgcgagggcagcgaccgcgcc
gtctccgcggcctag
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