Pseudomyxococcus flavus: VZL07_28390
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Entry
VZL07_28390 CDS
T11142
Symbol
lptD
Name
(GenBank) LPS assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
pfly Pseudomyxococcus flavus
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfly02000
]
VZL07_28390 (lptD)
Transporters [BR:
pfly02000
]
Other transporters
Pores ion channels [TC:
1
]
VZL07_28390 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
LptD_N
Motif
Other DBs
NCBI-ProteinID:
XSE94297
LinkDB
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Position
6779724..6782342
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AA seq
872 aa
AA seq
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MSLLVPLAAALLVTTSQVPLATPLALPNGEKAQLTADMVVYEAETKVVTARGNAVLRTDT
MQLRADEVTYDSVNPFVTATGNVMFVGPGGMAAVAESVKMDVRTYEANLEGGLFMQKEGV
TQDALFSAKTPQELRAMGETPILLSGSRIRRTGENTFAVENLAFTPCNCSPNEPGWRMEA
TSATVVLGERATMTLPVVYVKSVPVFALPWIYMPLSQRRTGLLLPKPTVSALNGFTLEQP
LFITLGRSYDLTFTPGYFSGGSDVVVDGVRRMRAQGVKGPRLLTEFRYAPSERTRGRATL
GFLYDLRPIRDPSTGEFYRRIVDGVETSEFVDERRGLRGEASWQHTQDLGNGWHDRVDAA
FVSDGFYTRDLTADVIVNNFQYLRSTATLYQRQDDLYAGLDVGLRQDIRWGYRFFQDNRV
PAAADPARPDLKGPSTFQRLPALTLALPERPVLGGLMGGLTVQYLRLAPLRGGYGDEGID
GIFRADGNYTEFGSANAFLDATQSDGVFNANDREARNRVDFLPRLSTSFAVGDLMRVSPS
LAVRQDVWLGEVSGRTWQRGYPIAGVLLESQLTRTFQGRDTSFRHAITPSLELRYVPGGW
GSLPTAGASEDGAARPYDELDAAVPYQLDGRTRGFLHAVLAVDQTLRIKRGNAIREPLRL
RIGQGFDLTRHVPAVGKVDDPGPVLRDTFARLTATAGIFTAAGTVRYDPNMGRIAGLSAE
LNVDDGKGHAVYARFDDVLTVGLPAINLGADPRSVGPDVFRRTVDTLVGGLSRVEPGFPA
AERAQALIAGTRLKLGFGLGVRYEAFVLPLYRDLTTREPRFVADQQTFGLSYGPACDCWR
VEGVMTLRRDLGLEFSGINLIVADFGSFGSGG
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcctcgttccgctcgccgctgcgctgctggtcaccacgtcccaggtgccgctc
gccacgccgttggcgctgcccaacggtgagaaggcgcagctcaccgcggacatggtcgtc
tacgaggcggagacgaaggtcgtcaccgcgcgtggcaacgccgtgctgcgcacggacacc
atgcagctgcgcgccgacgaggtgacgtacgactcggtgaacccgttcgtcacggccacc
ggcaacgtcatgttcgtggggcccggtggcatggccgccgtcgccgaatccgtgaagatg
gacgtgcgcacctacgaggcgaacctcgagggcggcctcttcatgcagaaggagggcgtc
acccaggacgccctgttctcggcgaagacgccccaggagcttcgggcgatgggcgagacg
cccatcctgctcagcggctcacgcatccgtaggacaggggagaacaccttcgcggtggag
aacctggccttcacgccctgcaactgcagcccgaacgagcccggctggcgcatggaagcc
acgtcggccaccgtcgtcctgggcgagcgcgccacgatgacgttgcccgtcgtgtacgtg
aagtccgtccccgtgttcgcgctgccgtggatctacatgcccctgtcccagcggcgcacg
ggcttgctgctcccgaagcccaccgtttccgcgctgaatggcttcacgctggagcagccc
ctcttcatcacgctggggcgcagctacgacctgacgttcacgccgggatacttcagtggc
gggagcgatgtggtcgtggatggagttcggagaatgcgcgcccagggcgtgaaggggcct
cgcttgctcaccgagttccgctacgcgcccagcgagcggacccgggggcgggccacgctg
gggttcctctacgacctccggcccattcgggacccgagcactggtgagttctatcgacgg
atcgtcgacggcgtcgagacgagcgagttcgtcgacgagcggcggggtctccggggcgag
gcttcctggcagcacacccaggacctgggaaacgggtggcatgaccgcgtggacgccgcg
ttcgtctcggacggcttctacacgcgcgacctcacggcggacgttatcgtcaataacttc
cagtacctgcgcagtacggccacgctgtatcagcgccaggatgacctgtacgcggggctc
gatgtggggctgcgccaggacatccggtgggggtaccgcttcttccaggacaaccgtgtc
cccgcggccgccgaccccgcgcgtccggacttgaagggcccctccaccttccagaggttg
ccagccctcacgttggctttgcccgagcgtcccgtgctcggcggcctcatgggaggcctg
acggtgcagtacctccgcctggcgccgctgcgcggtgggtatggggacgagggcatcgac
ggcatcttccgggccgacgggaactacacggagtttggttctgccaacgccttcctggac
gcgacgcagtccgacggcgtcttcaacgcgaacgaccgtgaggcccgcaaccgcgtggac
ttcctcccgcgcctgtcgacgtcgttcgcggtgggcgacctgatgcgcgtctcgccgtcg
ctggcggtgcgccaggacgtgtggctgggcgaggtctcggggcggacgtggcagcggggc
tatcccatcgcgggcgtgctgctggagagccagctcacgcgcacgttccagggacgcgac
accagcttccgccatgccatcaccccgtcgctggagctgcgctacgtgccgggagggtgg
ggcagccttcctacggccggcgcttctgaagatggcgcggcccgcccctacgacgagctg
gacgcggccgtgccgtatcagctcgatgggcgcacgcgcggtttcctgcacgcggtgctc
gccgtggatcagacgctgcgcatcaagcgaggcaacgccatccgcgagcccctgcgcctg
cgaatcggacagggcttcgatctcacccggcacgttcccgcggtgggaaaggtggacgac
ccgggccccgtgctgcgcgacaccttcgctcggctcaccgcgaccgcgggcatcttcacc
gccgcgggcaccgtccgatacgaccccaacatgggccgcatcgcaggcctgtccgccgaa
ctcaatgtcgatgacggcaagggccacgccgtctatgcgcgcttcgatgatgtattgacc
gtggggctgccagcgatcaacctcggcgcggatccgcgctccgtggggccggacgtcttc
cgccggactgtggataccctggtaggcggactatcccgagtcgagcccggcttccctgcg
gccgaacgggctcaagccctcatcgcgggtacgcgtttgaagctcggatttgggcttgga
gtgcggtacgaagccttcgtgctaccgctttaccgggatctaacaacccgagaacctcga
ttcgttgctgaccagcagacgttcggcctctcgtatgggcctgcatgtgactgctggcgg
gtcgagggagtcatgacgctgcggcgggacttggggctggaattctccggcatcaacctc
atcgtggcggatttcggatcctttggttccggaggctag
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