Pseudomyxococcus flavus: VZL07_30545
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Entry
VZL07_30545 CDS
T11142
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfly Pseudomyxococcus flavus
Pathway
pfly03030
DNA replication
pfly03410
Base excision repair
pfly03420
Nucleotide excision repair
pfly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VZL07_30545 (polA)
03410 Base excision repair
VZL07_30545 (polA)
03420 Nucleotide excision repair
VZL07_30545 (polA)
03440 Homologous recombination
VZL07_30545 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfly03032
]
VZL07_30545 (polA)
03400 DNA repair and recombination proteins [BR:
pfly03400
]
VZL07_30545 (polA)
Enzymes [BR:
pfly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VZL07_30545 (polA)
DNA replication proteins [BR:
pfly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VZL07_30545 (polA)
DNA repair and recombination proteins [BR:
pfly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VZL07_30545 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VZL07_30545 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH
CPV_RdRP_pol_dom
Motif
Other DBs
NCBI-ProteinID:
XSE94702
LinkDB
All DBs
Position
7372267..7374993
Genome browser
AA seq
908 aa
AA seq
DB search
MVDTSPSRSAPTLVLIDASGFIFRAYHAIPPLTTSKGVQTNAVLGFTRMVLKALRELTPT
HVALAFDKESRTERQKIDPTYKANREGPPEDLVPQFALIRRVVEAINVPVLEVAGWEADD
VIGTLAVKAKQEGFCVQVVTGDKDFVQIVDDDVRLYDPMKDVHTLPADVKARLGIEPRQM
RDYLALIGDAVDNVPKVPGIGPKTATELIQQFGDVETLLARLDEVKKPKIRENIASHRES
LLRAKQLVTFKTDLPLDVRMADLARRPLDAQRSRELFTELEFFALLKELPQQDGAAGAPE
AAREKPAPLTVTPKMVSEDAELATLAAAVREQGAVTLIPAFEGAPFGAKLVGLGLALPDG
QTAYVPLRHAQLGVTQVKPESFTAAFREVLEDAAVKKGGHDLKALCLVLANDGITLRGAH
DDVELLSYLLNPSRREHALVDLARERLHTELPPLPPAAEGKRGKKDRALADHTVEEVATG
FAIRAEAARRLAPELWKELEAAKLADLARDLELPLLPLLAQMERRGVLLDTAELSRTSVK
VDAAVEAQVKEVYRHAGREFNIGSNPQLVDVLFNELKLPVIKKGKTGPSADQEVLEKLSE
EHPLPGAIIEYRGLSKLKSTYLDTLPTLVAADGRIHTTYHQAATATGRLSSTDPNLQNIP
VRTELGREIRRAFVAAEGHQLVSADYSQVELRLLAHIAEDAVLIEAFRHDEDIHTRTAAE
VFGVAPDQVDREQRRVAKMVNFGIAYGLSPHGLAARLGIAQDVARDIIERYFTRYAGIKR
YLEETVDRARKTGYVETLYGRRRYMADLNSKNRGVAQAAERAAINMPIQGTAADLIKKAM
LAVDVALKAQKLRTQMLLQVHDELLFEAPDAEVEQVKALAVQAMSSVADLKVPLKVEVGA
GRSWADAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacaccagcccctcgcgctccgcgcccaccctggtcctcatcgacgcgtccggc
ttcatcttccgcgcctaccacgccatccctccgctcacgacgagcaagggcgtgcagacc
aacgccgtgctgggcttcacgcgcatggtgctcaaggccctgcgcgagctgacgcccacg
cacgtggcgctcgccttcgacaaggagagccgcaccgagcgccagaagattgaccccacg
tacaaggcgaaccgcgaggggcccccggaggacctcgtcccgcagttcgccctcatccgt
cgcgtggtggaagccatcaacgtgcccgtgctggaggtcgccggctgggaggcggatgac
gtcatcggcacgctcgccgtgaaggcgaagcaggagggcttctgcgtccaggtcgtcacc
ggcgacaaggacttcgtgcagattgtcgatgacgacgtgcgcctgtacgacccgatgaag
gacgtgcacacgctgcccgcggacgtgaaggcccgcctgggcatcgagccgcggcagatg
cgggactacctggccctcatcggcgacgcggtggacaacgtcccgaaagtgccgggcatc
ggcccgaagacggccacggagctcatccagcagttcggtgacgtggagacgctgctcgcg
cggctggacgaggtgaagaagccgaagattcgcgagaacatcgcctcccaccgcgagagc
ctcctgcgcgccaagcagctcgtcaccttcaagacggacctgccgctggacgtgcgcatg
gcggacctggcccgcaggcccctggacgcgcagcgctcgcgcgagctgttcaccgagctg
gagttcttcgcgctcctcaaggagctgccgcagcaggacggcgccgcgggcgcgcccgaa
gccgccagggagaagccggcgcccctgacggtgacgccgaaaatggtgagcgaggacgcg
gagctcgccacgctggcggctgccgtgcgcgagcagggcgccgtcacactgatccccgcc
ttcgaaggcgcgcccttcggcgcgaagctggtgggcctgggcctcgcgctgccggacgga
cagacggcctatgtgccgctgcggcacgcgcagctcggtgtcacgcaggtgaagccggag
tccttcaccgcggccttccgcgaggtgctggaggacgcggcggtgaagaaggggggccac
gacctcaaggcgctctgcctggtgctcgccaacgacggcatcaccctgcgcggcgcccac
gacgacgtggagctgctcagctacctgctcaacccgtcccgccgggagcacgcgctggtg
gacctggcccgcgagcggctgcacacggagctgccgccgctgccgcccgccgccgagggc
aagcggggcaagaaggaccgcgccctggcggaccacacggtggaggaggtggccacgggc
ttcgccatccgcgccgaggccgcccgccggctggcgcccgagctgtggaaggagctggag
gccgcgaagctggcggacctggcccgggatctggaactgccgctgctgccactgctggcg
cagatggagcggcggggcgtgctgctggacaccgccgagctgtcgcgcacctcggtgaag
gtggacgccgccgtcgaggcgcaggtgaaggaggtctaccggcacgcgggccgcgagttc
aacatcggctccaacccgcagctcgtcgacgtgctcttcaacgagctgaagctgcccgtc
atcaagaaggggaagacgggcccctcggcggaccaggaggtgctggagaagctgtccgag
gagcacccgctccccggcgccatcatcgagtaccgcggcctgtccaagctgaagagcacg
tacctggacacgctgcccacgctggtggccgcggacggacgcatccacaccacctaccac
caggcggccaccgccaccgggcggctgtcctccaccgacccgaacctccagaacatccct
gtccgcacggagctgggccgggaaatccgtcgggccttcgtggccgcggagggtcaccag
ctggtcagcgccgactacagccaggtggagctgcggctgctggcgcacatcgcggaggac
gcggtgctcatcgaggccttccgccacgacgaggacatccacacccgcaccgccgccgag
gtgttcggcgtggccccggaccaggtggaccgggagcagcggcgggtggcgaagatggtg
aacttcggaatcgcctatggcctgtcgccccatggcctggccgcgcggctcggcatcgcc
caggacgtggcccgcgacatcatcgagcgctacttcacgcgctacgcgggcatcaagcgc
tacctggaggagacggtcgaccgggcgcgcaagacgggctacgtggagacgctctacggc
cgccgccggtacatggcggacctgaactccaagaaccgcggcgtggcccaggccgccgag
cgcgccgccatcaacatgcccatccagggcacggccgcggacctcatcaagaaggcgatg
ctcgcggtggacgtggcgttgaaggcccagaagctgcgcacccagatgctgctccaggtg
cacgacgagctcctcttcgaggcgcccgatgccgaggtggagcaggtgaaggccctggcg
gtgcaggccatgtcctcggtggcggacctgaaggtgccgctcaaggtggaggtgggcgcg
ggtcgcagctgggcggacgcgcactga
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integrated database retrieval system
