Pseudomyxococcus flavus: VZL07_32940
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Entry
VZL07_32940 CDS
T11142
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfly Pseudomyxococcus flavus
Pathway
pfly03420
Nucleotide excision repair
pfly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VZL07_32940
03430 Mismatch repair
VZL07_32940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfly03400
]
VZL07_32940
Enzymes [BR:
pfly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VZL07_32940
DNA repair and recombination proteins [BR:
pfly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VZL07_32940
MMR (mismatch excision repair)
Other MMR factors
VZL07_32940
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XSE95167
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Position
7895913..7897991
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AA seq
692 aa
AA seq
DB search
MASRTDMLRADPARPSLRIDYAALLNEEQLRAVEAGAGPVLVIAGAGSGKTRTLTFRVAR
LLERGVPPEGILLLTFTNKAAREMTRRVEELAGASVDVRRILGGTFHHAAHVLLRQYAGV
LGFSRSFTVLDREDARDLMVTCIAERRLKSDKRFPRPDLVLDLVSLSANLQQPVSHVLMD
RRPQLLPLAPEVLAAAARYQQRKAQMHLMDFDDLLVHLKRLLTHHPDVREALTERFRCVL
VDEYQDTNRLQGDLVDLLAGERKDLTVVGDDCQAIYSFRGADFSNIIDFPQRYPGCSVHS
LTRNYRSTPEILRLANASITLNTQQFPKVLTAARPSGARPLIVPTEDAAGQAAFVAERVQ
ELRAQGMSLEAMAVLYRAHSHSLELQLELTRRGIPFRVRSGVRFFEQSHIKDVLAHLRVV
NNPADELAFKRVIRRVPGVGPATAEHVWMSLRALPEGTPLPEGLSHPEVVSHLPRKARKG
FQAFSDLMGRLTRPGASTAPERLIEDVLAGGYAEYLKAEYAEEEHREEDVRQLAEFARRF
EDLARFLSEIALVSEFAAGEALGEEPSGAFLTLSTVHQAKGLEWRAVFVLWLVDGRFPLS
LATRLPEEEEEERRLFYVALTRARDTLSLVYPLSVLPRDGERILLRPSRFLQELPGGEDA
PFERRSPSTLEAEPGAAVGQDGPPPGGTDPVD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgcaccgacatgctcagggccgatccggcgaggccctcgctgcggatcgac
tacgccgcgctcctcaacgaggagcagctccgggcggtggaggcgggggcggggcccgtg
ctggtcatcgccggggcgggctccggcaagacgcgcacgctgaccttccgggtggcgcgg
ctgctggagcggggcgtgccgcccgagggcatcctcctgctcacgttcaccaacaaggcc
gcccgggagatgacgcgccgggtggaggagctggccggcgcctccgtggacgtgcggcgc
attctcgggggcaccttccaccatgccgcgcacgtgctgctccggcagtacgcgggggtg
ctcggcttctccaggagcttcaccgtgctggaccgcgaggacgcgcgggacctgatggtg
acgtgcatcgccgagcgccggctcaagagtgacaaacgcttcccccggccggacctggtg
ctcgacctggtgtcgctgtcggccaacctccagcagcccgtgtcgcacgtgctgatggac
cgcaggccccagctgctcccgctggcgcccgaggtgctcgccgccgccgcgcgctaccag
cagcgcaaggcgcagatgcacctgatggacttcgacgacctgctggtgcacctcaagcgg
ctgctgacgcaccaccccgacgtgcgcgaggccctcaccgagcgcttccgctgcgtcctg
gtggacgagtatcaggacaccaaccggctccagggcgacctggtggacctgctcgccggg
gagcgcaaggacctgacggtggtgggggatgactgccaggccatctacagcttccggggc
gcggacttctccaacatcatcgactttccgcagcgctacccggggtgctcggtccactcg
ctgacccgcaactaccgctccaccccggagattctgcgactggccaacgcctccatcacc
ctcaacacccagcagttccccaaggtgctgacggcggcgcggccttccggggccaggccc
ctcatcgtcccgaccgaggacgccgccgggcaggccgccttcgtggccgagcgagtccag
gagctgcgcgcgcagggcatgtccctggaggccatggcagtcctgtaccgggcccacagc
cactcgctggagctccagctcgaattgacccgccgcggcatcccgttccgggttcgctcc
ggggtgcgcttcttcgagcagtcccacatcaaggacgtgctggcccacctccgggtcgtg
aacaaccctgcggatgagctggccttcaagcgggtcatccggcgcgttcctggcgtgggc
ccggcgacggcggagcacgtctggatgtcccttcgcgcgctgccggaggggacgccgctg
ccggaggggctgagccacccggaggtcgtctcgcacctgccgcgcaaggcccggaagggt
ttccaggccttcagcgacctgatggggcggctgacacggccgggggcgtccaccgcgccg
gagcggctcatcgaggacgtgctggccgggggctacgcggagtacctgaaggcggagtac
gccgaggaggaacaccgggaggaggacgtccggcagctggcggagttcgcccgccgcttc
gaggacctggcgcgcttcctgtcggagatcgcgctggtgtcggagttcgcggccggagag
gccctgggggaggagccgtcgggggccttcctgacgctgtccaccgtccaccaggcgaag
gggctcgaatggcgggccgtcttcgtcctctggctggtggacgggcgctttccgctgtcg
ctggccacacgcctgcccgaggaggaggaagaggagcgccggttgttctacgtggccctc
acccgggcccgggacacgttgtcgctggtgtaccccttgtcggtgctgccccgggacggc
gagcggatcctcctgcgcccgtcccggttcctccaggaactgcccggcggggaggacgca
ccgttcgagcggcgctccccgtccaccctggaggcggagcccggggcggccgtggggcag
gacgggccccctccgggtggaacggacccggtggactga
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