Pseudomyxococcus flavus: VZL07_35860
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Entry
VZL07_35860 CDS
T11142
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pfly Pseudomyxococcus flavus
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfly03016
]
VZL07_35860
Enzymes [BR:
pfly01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VZL07_35860
Transfer RNA biogenesis [BR:
pfly03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VZL07_35860
Prokaryotic type
VZL07_35860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
XSE95710
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All DBs
Position
8677931..8678776
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AA seq
281 aa
AA seq
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MLPSTSKRIPVALWIWYRGGIFRGFQRQPEGPTVQSALEEALQSVGVPATLMPSGRTDRG
VHARMQVVSVRLEPGDSAESLEQRLPARLPPGLGLCGVRRPRSFHAQWSASGKEYRYRLQ
LGGTATPSWAPYVLDVPAEPLIHGATVTPERLAELLRLAEGTRDFIAFHEKSSPRKPRTL
ESATLHALGGGLYEARLCGDGFARYQVRYLIGSALKVAAGLLPEEAWRAALETGQAMEGF
KAPAHGLVLWEVRYPPGVDPFTTGERLHPPGLPLEPPFHFG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgctcccatcgacttccaagcggattcctgtcgcactgtggatctggtaccgcggcgga
atcttccggggcttccagcgccagccggaggggcccaccgtccagtccgcgctggaagag
gcgctccagtccgtgggcgtgcccgcgaccttgatgccttcggggcggacggaccgcggc
gtccacgcgcgcatgcaggtggtgagcgtccgcctggagccaggagattcggcggagtcg
ctcgagcagcggctgcccgcacggctgccgccggggctggggctttgcggggtgcgccgg
ccgcgctccttccatgcgcagtggagcgcgagcggcaaggagtaccgctaccggctccag
ctgggcggcaccgcgaccccctcctgggcaccgtacgtgctggacgttccggccgagccg
ctgatccacggcgccaccgtgacaccggagcgcctggcggagctgctgcgtctggccgag
gggacgcgggacttcatcgcgttccacgagaagtccagcccgcgcaagccccgcacgctg
gagtcggccaccctgcacgcgctgggcggtggactctatgaggcgcggctgtgtggggac
ggcttcgcgcgctaccaggttcgctatctcatcgggagcgcgttgaaggtggccgcgggg
ctgctgccggaagaggcgtggcgcgcggcgctcgagactgggcaggccatggagggcttc
aaggcgcccgcgcacggcctggtgctctgggaggttcgctaccctcccggagtggacccc
ttcaccaccggggagcgtctccatcccccggggcttccgctggagccacccttccacttc
gggtga
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