Pseudomyxococcus flavus: VZL07_37930
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Entry
VZL07_37930 CDS
T11142
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pfly Pseudomyxococcus flavus
Pathway
pfly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VZL07_37930 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfly03019
]
VZL07_37930 (groL)
03110 Chaperones and folding catalysts [BR:
pfly03110
]
VZL07_37930 (groL)
03029 Mitochondrial biogenesis [BR:
pfly03029
]
VZL07_37930 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfly04147
]
VZL07_37930 (groL)
Enzymes [BR:
pfly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VZL07_37930 (groL)
Messenger RNA biogenesis [BR:
pfly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VZL07_37930 (groL)
Chaperones and folding catalysts [BR:
pfly03110
]
Heat shock proteins
HSP60 / Chaperonin
VZL07_37930 (groL)
Mitochondrial biogenesis [BR:
pfly03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VZL07_37930 (groL)
Exosome [BR:
pfly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VZL07_37930 (groL)
Exosomal proteins of other body fluids (saliva and urine)
VZL07_37930 (groL)
Exosomal proteins of breast cancer cells
VZL07_37930 (groL)
Exosomal proteins of colorectal cancer cells
VZL07_37930 (groL)
Exosomal proteins of bladder cancer cells
VZL07_37930 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XSE96107
LinkDB
All DBs
Position
complement(9228397..9230037)
Genome browser
AA seq
546 aa
AA seq
DB search
MTAKEIFFHQSAREAILRGVRILSDAVAVTLGPKGRNVVIEKSFGSPTITKDGVTVAKEI
DLENKFENMGAQMVKEVASKTSDKAGDGTTTATVLARAIYEEGLKLVAAGHSPMELKRGI
DKAVEVVVGELKSLSKPTADKKAITQVGTISANGDETIGAIIADAMEKVGKEGVITVEEA
KGLETTLDVVEGMQFDRGYVSPYFVTNRERMEAVLDDPYILISEKKVSSMQDMIPLLEQV
ARSGKPLLIIADDIEGEALATLVVNKIRGVLNVCAVKAPGFGDRRKEMLQDIAVLTGGTV
VSEDLGHKFETLTLNDLGRSKRATVDKDNTTIVDGVGTKAAIEGRIKLIRGQIETVTSDY
DREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYL
RALPALEKLQLGGEQNFGVDIIRRALQEPLRKIASNAGVEGAVVINKVREGQGAFGYNAR
TETYEDLEKAGVIDPTKVERTALQNAASVASLLLTTEAMVAERPKGKAKAGAGAGMPDYG
GDDMDY
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgaaggagattttcttccatcagtccgcgcgtgaggccatcctgcgcggcgtc
cgcatcctgtcggacgcggtcgcggtgaccctcggtcccaagggccggaacgtggtcatc
gagaagagcttcggctcccccacgatcaccaaggacggcgtcaccgtcgccaaggagatc
gacctcgagaacaagttcgagaacatgggcgcgcagatggtgaaggaggtcgcgtccaag
acctccgacaaggccggtgacggcaccaccaccgccacggtgctggcgcgcgccatctat
gaggagggcctcaagctggtggccgccggccacagccccatggagctcaagcgcggcatc
gacaaggccgtcgaggtcgtggtgggcgagctgaagagcctgtccaagccgaccgccgac
aagaaggccatcacccaggtgggcaccatctccgccaacggtgatgagaccatcggcgcc
atcatcgcggacgcgatggagaaggtgggcaaggagggcgtcatcaccgtcgaggaggcg
aagggcctcgagacgacgctcgacgtggtcgagggtatgcagttcgaccgcggctacgtg
tccccgtacttcgtgaccaaccgcgagcggatggaggccgtcctggacgacccctacatc
ctcatcagcgagaagaaggtctcgtcgatgcaggacatgattccgctgctcgagcaggtg
gcccgctccggcaagccgctgctcatcatcgccgacgacatcgagggcgaggccctggcc
accctggtggtcaacaagatccgcggcgtgctgaacgtgtgcgcggtgaaggccccgggc
ttcggtgaccgccgcaaggagatgctgcaggacatcgccgtcctcaccggcggcacggtg
gtcagcgaggacctgggtcacaagttcgagaccctgacgctgaacgacctgggccgctcc
aagcgcgccacggtggacaaggacaacaccaccatcgtcgacggcgtgggcaccaaggcg
gccatcgagggccgcatcaagctcatccgtggccagatcgagacggtcaccagcgactac
gaccgcgagaagctccaggagcgtctggcgaagctggtgggcggcgtggccgtcatcaac
gtcggcgcggccaccgagacggagatgaaggagaagaaggcccgcgtcgaggacgcgctg
cacgcgacccgcgcggccgtcgaggagggcatcgtccctggcggcggcgtggcctacctc
cgcgcgctgcccgcgctggagaagctgcagctgggcggtgagcagaacttcggcgtggac
atcatccgccgcgcgctccaggagccgctgcggaagatcgccagcaacgccggcgtcgag
ggcgccgtggtcatcaacaaggtccgcgagggccagggcgcgttcggctacaacgcccgc
acggagacctacgaggacctggagaaggccggcgtcatcgacccgaccaaggtcgagcgc
accgcgctgcagaacgccgcctccgtcgcctcgctgctgctgaccaccgaggccatggtc
gccgagcgtccgaagggcaaggccaaggctggcgctggcgccggcatgccggactacggc
ggcgacgacatggactactga
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