Pseudomyxococcus flavus: VZL07_38745
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Entry
VZL07_38745 CDS
T11142
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
pfly Pseudomyxococcus flavus
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfly03009
]
VZL07_38745
Enzymes [BR:
pfly01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
VZL07_38745
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
VZL07_38745
Ribosome biogenesis [BR:
pfly03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VZL07_38745
23S rRNA modification factors
VZL07_38745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_12
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
XSE96262
LinkDB
All DBs
Position
complement(9438636..9439376)
Genome browser
AA seq
246 aa
AA seq
DB search
MKPRKERLDVLVVERGLAESRTKAQALILAGQVVVDDQRVDKPGTLIPQEAELRLKGEVL
PYVSRGGLKLKGAIDRFGLDVRGRVAADIGASTGGFTDCLLQHGAVRVHAIDVGYGQLHE
KLRTDPRVRSRERVNARYLTDEDLPEKVGVVVIDVSFISLTQVLPSVLTYLEPGGLLVAL
VKPQFEVGPDRVGKGGVVRDAAARQDAIDTVTAFVREQGLEVLGLMDSTVPGPAGNVEAL
LVASRP
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcctcgcaaggagcggctggacgtgctggtggtggagcgcgggctcgcggagtcg
cgcaccaaggcccaggcgctcatcctggcgggccaggtcgtggtggatgaccagcgcgtg
gacaagcccggcacgctgattccgcaggaagcggagctgcgcctcaagggcgaggtgctg
ccctacgtgtcgcgcggcggcctcaagctcaagggcgccatcgaccgcttcgggctcgac
gtccggggcagggtggccgcggacatcggcgccagcaccggtggcttcacggactgcctg
ctccagcacggcgccgttcgcgtgcatgcgattgacgtgggctacgggcagctccacgag
aagctccgcacggacccgcgggtgcgctcgcgcgagcgcgtcaacgcgcgctacctcacg
gacgaggacctgccggagaaggtgggcgtcgtcgtcatcgacgtgagcttcatctccctc
acgcaggtgctgccgtcggtgctgacgtacctggagccgggcggcctgctggtggcgctg
gtgaagccccagttcgaggtggggccggaccgggtggggaagggcggcgtggtgcgcgac
gccgcggcccggcaggacgccatcgacacggtgacggcgttcgtgcgcgagcaggggctg
gaggtgctcgggctgatggactcgacggtgcccgggcccgctggaaacgtggaggcgctc
ctcgtcgccagcaggccctga
DBGET
integrated database retrieval system
