Pseudomyxococcus flavus: VZL07_38855
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Entry
VZL07_38855 CDS
T11142
Name
(GenBank) oligopeptide/dipeptide ABC transporter ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
pfly Pseudomyxococcus flavus
Pathway
pfly02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfly00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VZL07_38855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfly02000
]
VZL07_38855
Transporters [BR:
pfly02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VZL07_38855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_16
AAA_22
RsgA_GTPase
AAA_29
SMC_N
ATP-synt_ab
AAA
nSTAND1
NB-ARC
AAA_5
Motif
Other DBs
NCBI-ProteinID:
XSE96284
LinkDB
All DBs
Position
complement(9460885..9461937)
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AA seq
350 aa
AA seq
DB search
MSAGPLLQVRDLRVHFPVRGGLFGRVRGAVKAVDGVSFDVMRGETLGLVGESGCGKSTLG
RAVLRLVEATTGSIRFDGQELAGVPQRRLRPLRQRMQLVFQDPYASLNPRMTVREILEEP
FAIHGLARGPGAREREVAALVDAMGLPREALERFPHEFSGGQRQRIGIARALALRPDLVV
ADEPISALDVSVQAQIVNLLVDLQRERGLTYVFIAHDLNIVEYVSTRVAVMYLGRIVELA
PAATLYRQPRHPYTQALLSAVPVPDPGHARTRLLVPGEPPSPLAPPPGCTFHPRCPHAME
RCRREAPPSYSLGGGHFAACFLAEPEARAAPSEAPSGGSTGVLAQPPSSG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgggccactgctccaggtcagggacttgcgggtgcacttcccggtgcgcggc
ggcctcttcggccgggtgcgcggcgcggtgaaggccgtggacggcgtgagcttcgatgtg
atgcgcggcgagacgctcgggctggtgggggagagcggttgcggcaagagcacgctgggg
cgcgcggtgctgcggttggtggaggccacgacggggtccatccgcttcgatggccaggag
cttgccggcgtgccccagcggcggctccggccgctgcggcagcggatgcagctcgtcttc
caggacccctacgcctcgctcaatccccggatgaccgtccgcgagatcctcgaggagccc
ttcgccatccacgggctggcgcgaggtcccggagcgcgggagcgtgaggtggcggcgctg
gtggacgccatggggttgccgcgcgaggcgctggagcgcttcccccacgagttctccggc
ggccagcgccagcgcatcggcatcgcccgggcgctcgcgctgcggcccgacctggtggtg
gcggacgagcccatcagcgcgctggacgtgtccgtgcaggcgcagatcgtcaacctgctg
gtggacctgcagcgcgagcggggcctcacctacgtcttcatcgcccacgacctgaacatc
gtcgagtacgtctccacccgggtggccgtcatgtacctggggcgcatcgtcgagctcgcc
cccgccgccacgctctaccgccagccgcgccacccctatacccaggcgctgctgtccgcg
gtccccgtgccggacccggggcacgcgcgtacgcggctgctggtgccgggcgagccccca
tccccgctggccccaccgccgggctgcaccttccatccgcgctgtcctcatgcgatggag
cggtgccggcgagaggcgcctccgtcctattccctgggaggagggcacttcgcggcctgt
ttcctggcggagcccgaggcacgagcggcgccgtccgaggcaccttctggagggagcacc
ggtgttctggctcagccaccatcatccggatga
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