KEGG   Pyrolobus fumarii: Pyrfu_0109
Entry
Pyrfu_0109        CDS       T01620                                 
Name
(GenBank) flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pfm  Pyrolobus fumarii
Pathway
pfm03030  DNA replication
pfm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pfm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pyrfu_0109
   03410 Base excision repair
    Pyrfu_0109
   03450 Non-homologous end-joining
    Pyrfu_0109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfm03032]
    Pyrfu_0109
   03400 DNA repair and recombination proteins [BR:pfm03400]
    Pyrfu_0109
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pfm04147]
    Pyrfu_0109
DNA replication proteins [BR:pfm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Pyrfu_0109
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Pyrfu_0109
DNA repair and recombination proteins [BR:pfm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Pyrfu_0109
Exosome [BR:pfm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Pyrfu_0109
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 MPAB_Lcp_cat RecR_HhH
Other DBs
NCBI-ProteinID: AEM37981
UniProt: G0EEE0
LinkDB
Position
complement(101432..102484)
AA seq 350 aa
MGVNIREIIPPNAIQTLSLDALRGKAVAIDAYNALYQFLAAIRQPDGTPLMDSRGRITSH
LSGLFYRTINLIEHGIKVVYVFDGKPPEIKSIEIERRKKVKSEAAKKYEEAIKKGDLEAA
RRYAQMASRLTEDMVKEAKRLLDAMGVPWVQAPADGEAQAAYMARKGDVWAAASQDYDAL
LFGAPRLVRNLTITGRRKLPKKDVYVEIKPELIELDKLLKALGITREQLIVIGILVGTDY
NPDGVRGIGPKTALRMVKAQPDVRKLLRSLPRNEFPTEPEKIFEYFLNPPVTDEYKLEWR
EPDEKMIYEILVVEHDFSPERVKNAIQRLKKAYREHFKTKQLGLDMWFKR
NT seq 1053 nt   +upstreamnt  +downstreamnt
gtgggagtaaacatacgcgagattataccgcctaatgcaattcaaacactgagtctcgat
gctctgcgaggcaaagcggttgccattgacgcctataacgcgctttatcagttcctcgcg
gcaatccggcagccggatggcacaccgcttatggactcgcgtggacgcatcactagtcat
ctcagcggcttgttctaccgcacgataaacttgatagaacatggtatcaaagtagtgtac
gtgtttgacggtaaaccgccagagataaagagcattgagatagaacgtagaaagaaagtg
aaaagcgaggcggcaaagaaatacgaagaggcaatcaagaagggtgacctagaagccgct
agacgttatgcacagatggcgtcaaggctaaccgaggatatggtaaaggaggccaaaagg
cttcttgacgcaatgggagtcccgtgggttcaagcgcctgctgacggtgaagcgcaagct
gcgtatatggcgcgtaagggggatgtgtgggcggcagcaagccaagactatgatgcgctc
ttgtttggcgctccgaggcttgtgagaaacctcactataactggcagaaggaagttgcca
aagaaggatgtgtatgttgagataaagccggagctaatagagctggataagctgctcaaa
gcattaggtataacgcgtgaacagttgatagttattggtatactagtcggcacagattac
aacccggatggtgtgcgaggtatagggccgaaaacagcccttcgcatggtaaaagcgcag
ccagatgtacgtaaactcctacgctcgttgccgcgtaacgagtttcctacagaacccgag
aagatattcgagtacttcctaaatcctccagtgactgacgagtacaagcttgaatggcgc
gagccagacgagaagatgatatacgagatactcgtggtggaacacgatttctcgccagaa
cgagtcaagaacgccatacagaggctaaagaaggcttaccgcgagcacttcaagactaag
cagcttggtctcgacatgtggtttaagaggtga

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