Pyrolobus fumarii: Pyrfu_0111
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Entry
Pyrfu_0111 CDS
T01620
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pfm
Pyrolobus fumarii
Pathway
pfm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Pyrfu_0111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfm03019
]
Pyrfu_0111
03009 Ribosome biogenesis [BR:
pfm03009
]
Pyrfu_0111
04131 Membrane trafficking [BR:
pfm04131
]
Pyrfu_0111
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfm04147
]
Pyrfu_0111
Messenger RNA biogenesis [BR:
pfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Pyrfu_0111
Ribosome biogenesis [BR:
pfm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Pyrfu_0111
Membrane trafficking [BR:
pfm04131
]
SNARE
SNARE associated proteins
Others
Pyrfu_0111
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Pyrfu_0111
Exosome [BR:
pfm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pyrfu_0111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_14
AAA_5
AAA_22
AAA_33
TIP49
AAA_lid_PRS2_C
Vps4_C
nSTAND3
IstB_IS21
AAA_24
RNA_helicase
AAA_18
AAA_28
ATPase_2
Mg_chelatase
ABC_tran
NPHP3_N
NB-ARC
Sigma54_activat
AAA_17
TsaE
AAA_7
AAA_3
DUF815
Parvo_NS1
NACHT
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
AEM37983
UniProt:
G0EEE2
LinkDB
All DBs
Position
complement(102785..105001)
Genome browser
AA seq
738 aa
AA seq
DB search
MSTVAVRSKRPEVVLRVAEAKPKDVGKGKVRIDIDIMKMLGVEPGDVVEIEGKRVTAATV
WPSYPEDQGLRIIRMDGLTRKNAGVSIGDKVIVRKADAKPAQMVKLAPASFTITVDPGFV
SFVRKRLTDYPVVEGDSVMVPVVGHAIPFVVVKTRPSGVVVINNNTNIVILEKPVEQSNV
PRVTYEDIGGMKDVIQKVRELVELPLKHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAI
ANETDAYFIAINGPEIMSKYYGESEQRLREIFEEAKKHAPAIIFIDEIDAIAPKRDEVIG
EVERRVVAQLLALMDGLESRGDVIVIAATNRPNAIDPALRRPGRFDREIEIPLPDKQGRL
EILQIHTRNMPLAEDVDLEKLAEMTKGFTGADLAALVREAAMHALRRYLPEIDLDKDTIP
PELLEKMEVRMEDFLAALREIVPSGLREIYVEVPEVHWDDIGGLEDVKQQLREAVEWPLK
HPEVFQRLGIRPPKGILLFGPPGVGKTLLAKAAATESGANFIAVRGPEILSKWVGESEKA
IREIFRKARQHAPAIIFFDEIDAIAPARAEVPDTSGVTYRIVNQLLTEIDGIVPLQNVVV
IAATNRPDILDPALLRPGRFDKIIYVPPPDKKARLEILRIHTRHTPLADDVDLEYIASVT
EGYSGADLEALVREAALAALREDINATKVHMRHFEEALKRVKPSITPEMVRFYEEWYEKA
RQQLPGVTVKKMKPNIYM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgtagctgttaggtcgaagcgcccagaggttgtactgcgcgtagccgaggct
aagccaaaagatgttggtaaaggtaaggtacgaatcgacatcgacatcatgaagatgctt
ggtgtcgagcctggtgatgtcgtagaaatcgagggtaagagggtaacagccgcaaccgtt
tggccgagctatcccgaggatcagggactacggatcatcagaatggatggattgactaga
aagaatgctggtgtgagtataggagacaaggttatcgtgcgcaaggctgatgccaaacca
gctcagatggtaaagttagcgcccgcaagctttacaattactgtcgaccctggctttgtt
agcttcgtaaggaagagactaaccgattatcctgttgttgaaggagacagtgtcatggtt
ccagtggtcggccatgcaatcccgttcgtcgttgtcaagactaggccgtccggcgtcgta
gtaattaacaacaatacgaacatagtgatactggagaagcctgttgagcaaagcaacgtg
ccaagagtaacttacgaggatataggtggaatgaaagatgtgatacaaaaggtgcgagag
cttgtagaactgccattgaagcacccggagctcttcaagaggcttggcatagagcctccg
aagggcatcctgctctatgggcctcccggtgtaggcaagacgttgctagccaaagcgata
gctaacgagacagatgcatacttcattgctatcaacggcccggagataatgagcaagtac
tatggggagtccgagcagaggctacgtgagatattcgaggaggctaagaagcatgcacca
gccataatattcatcgatgagatcgacgcgatagcgcccaagagagatgaagtcataggt
gaggttgagagacgagttgtggctcagctactcgccctcatggatggcttagagagtaga
ggcgacgtgatagtaatcgctgcaactaatcggccgaatgccatagaccccgcgcttagg
aggcctggcaggttcgatagggaaatagagattccactaccagacaagcaaggaaggctt
gagatactccagatacacactcgtaacatgccattagccgaagacgtggatcttgagaag
ctagctgagatgaccaaggggttcacaggagcagatctggctgcgctcgtacgcgaagct
gccatgcatgcattgagacgatatctaccagagattgacctcgacaaagatacgatacca
ccggagctcctcgagaagatggaagtgcggatggaagacttcctggcggcattacgtgag
atagtgccaagtggtttacgtgagatctatgttgaggttcctgaggtgcattgggatgat
attggtggtcttgaggatgttaagcagcagcttcgtgaggctgtggagtggcccttgaag
cacccagaagtgttccagaggcttggtattcgtccgccgaaggggattctgctcttcggc
ccgccgggtgtcggcaagaccctgctcgcgaaggccgctgcaaccgagagcggcgccaac
ttcatagccgtgagaggcccagagatactctcaaagtgggtaggcgaaagcgaaaaagca
atacgagagatattccgcaaggccaggcagcatgcaccggcgataatcttctttgatgag
atcgacgcgatagcgccggcgcgtgcagaagtcccagatactagtggtgttacctaccgt
atagtcaaccagttgctgacagagatagatggtatagtgccgcttcagaatgtggttgtg
attgctgccactaacaggccggacatcctagacccggcgctactcagaccaggcagattc
gataagataatctatgtaccgccgccagacaagaaggcgaggctagagatactcaggata
cacactaggcatacaccgctagcggatgatgtggatctagagtacattgcaagcgtcact
gaaggatatagcggtgcagatctagaggcactggtgcgtgaggcagcgttagcggcgcta
agagaggatatcaacgccaccaaggtgcatatgaggcacttcgaggaggcgttaaagcgt
gtaaagccatcaataactcccgagatggttagattctatgaagagtggtacgagaaggct
agacaacaattacctggagtcacagtgaagaagatgaaaccgaacatctacatgtaa
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