Pyrolobus fumarii: Pyrfu_0125
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Entry
Pyrfu_0125 CDS
T01620
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pfm
Pyrolobus fumarii
Brite
KEGG Orthology (KO) [BR:
pfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfm03016
]
Pyrfu_0125
Enzymes [BR:
pfm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Pyrfu_0125
Transfer RNA biogenesis [BR:
pfm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Pyrfu_0125
Prokaryotic type
Pyrfu_0125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
IRF-3
Motif
Other DBs
NCBI-ProteinID:
AEM37997
UniProt:
G0EEF6
LinkDB
All DBs
Position
complement(114385..115299)
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AA seq
304 aa
AA seq
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MEVGVVYLGVSAAVPAYGRGLPSIAVMYRGLVYLFDVGEGTQERLVEAGLSPLRVKVVAV
THMHGDHFLGLAGLLQSMTMGGRREELFVIGPRGLLEYIEIVERLTGHVRSFDIVFREVE
EGVVYEDNRVVIKAFRVCHGHVAAYGYVFEEKPRPGRVKLEKLKELGLKPGPYLSRVKRG
ESVIVNGVLVRPEDVLEEPRPGVRVVYTGDTRPCKTVIDVARGADLLIHESTFLESEASE
AHEKGHSTALEAGLVAAKAGVKCLALTHFSARYRELDVFETEARRNFGNCVYAARPLLIH
PLRL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtggaggtaggcgtggtgtatctgggcgttagtgcggctgtaccagcgtatggtagaggc
ttaccgtcaatagctgtgatgtaccgtggtctagtgtacctatttgacgtcggcgaaggt
acgcaagagaggcttgtagaagccgggctgagcccgcttcgtgttaaggttgtggcagtg
acgcatatgcatggtgaccattttctcggactggcagggctcttgcaatctatgaccatg
ggtggtcgtagagaggaattgttcgtaattggtcctcgtgggttgctagagtatatagag
attgttgagcggctgacgggtcatgttaggagctttgacatcgtgtttcgggaggtagaa
gagggtgtcgtgtatgaagataatcgtgtggttatcaaggcttttcgcgtctgtcacgga
catgtagcggcgtacgggtatgtctttgaggagaagccgagacctgggcgtgttaagctt
gagaaacttaaagaacttggcttaaagcctgggccttacctatctcgcgtgaagcgcggt
gagagtgtaatagttaatggtgttcttgtgaggcccgaagatgtgctagaggagccgagg
ccgggtgtgcgcgtagtctacactggcgatactcggccctgtaaaacggtcatagacgtg
gcgcgaggtgctgatctgttgatacacgagtctacctttctagagagtgaggcaagcgag
gcacatgagaagggacacagcactgcattggaggctgggctggttgccgcaaaagccggt
gtaaagtgtcttgctctcactcacttcagtgcaaggtatcgcgaattggatgtgtttgaa
actgaggccaggcgaaatttcggaaattgtgtatatgcggctaggccgctactaatacac
ccactgcgtctttga
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