Pyrolobus fumarii: Pyrfu_0166
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Entry
Pyrfu_0166 CDS
T01620
Name
(GenBank) THUMP domain-containing protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
pfm
Pyrolobus fumarii
Brite
KEGG Orthology (KO) [BR:
pfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfm03016
]
Pyrfu_0166
Enzymes [BR:
pfm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pyrfu_0166
Transfer RNA biogenesis [BR:
pfm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pyrfu_0166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
THUMP
Motif
Other DBs
NCBI-ProteinID:
AEM38038
UniProt:
G0EEJ7
LinkDB
All DBs
Position
148790..150226
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AA seq
478 aa
AA seq
DB search
MEGMEERVAHVASDIIVKSLQVLLEYPLCDRCLGRMFALLGKGWSNKQRGEAIKMIIIMV
LHRLAREGDEEASKLLERLSASLYNTAPRLYEELGVERTEIVCPLCGGVFDKVVNEVVER
AARLLREVEAESFVVGARLAEEVRGVEDSIVANYGLVHAESIAAELKREVGKRLRDLGFS
VDFSNPDVTLLVEYPSGRIEATINPILILGFYKKTARRVSQSSWITSFGVKRYPFSVQDA
YTPLLELYKGSEIVIHAAGREDVDVRMLGSGRPIVVEVKEPRRRRVKIEDAERSVNDEWV
GLFKTVLIERVTRSFMRSVVKGVEGEERHAKIYRALVYVPDGVSHEDIEKLVEFFKGRLV
RQRTPRRVRHRRADIIRERKVYEVSAYKISDNLFIAFIRAEGGLYIKELVSGEDTWPGFP
DALGKQAHCVELDVVKVETKLRVKEGLVSGAARGGVSNGKATQGLSPSHKEASTQTHP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaagggatggaggagcgcgtggcacacgtagctagcgatatcatagtgaagagtctg
caggtactcctagagtacccgctttgcgaccgttgtcttggtaggatgttcgcattgcta
ggtaagggatggagcaacaagcagcgaggagaggcaatcaagatgataataatcatggtg
ttacatcgtcttgcaagggagggtgatgaggaagcatctaagctcctagagaggctttca
gcatcgctatacaacactgctccaaggctttacgaggagcttggcgtggagcgcaccgag
attgtatgccctctgtgtggtggagtgtttgacaaggtggttaacgaggttgttgagcgt
gcagcaaggctcctgcgtgaagttgaggcagagtcgtttgtcgtcggtgctaggcttgca
gaagaggtaaggggtgtcgaagatagcatagttgctaactacgggcttgtgcatgcagag
tctatcgctgctgaattaaaacgcgaggttggtaagaggctacgcgacctaggatttagc
gtggatttctcgaatccggatgtgactctactcgtcgaatatcccagcggccgcatagaa
gcaaccataaaccctatactgatcctaggcttctacaagaagactgcaaggagagtgtca
caatcctcttggataacgtcgttcggtgtgaagaggtatccattttcggtgcaagatgcg
tacacacctctcctagagctctataagggttccgagatagtgatacacgctgctggacgc
gaagatgttgatgtcagaatgttgggctctggtaggcccatagttgttgaggttaaggag
cctagaaggcggagagtgaaaattgaggacgcggagagaagtgttaacgatgagtgggtt
ggactcttcaagaccgtgcttattgagcgtgtgactagatcgtttatgagaagtgtagtc
aaaggtgttgaaggcgaggagagacacgctaagatatatcgcgctctagtttatgttcca
gatggcgtgtcgcacgaggatattgagaagcttgtcgagttcttcaagggaaggcttgta
aggcaacgtacacctcgaagagttagacaccgtagagctgacattatacgcgagcgtaaa
gtttacgaggtaagtgcttacaagatctccgacaatctgttcatagcctttatcagagct
gaaggaggcctgtacattaaggagcttgtgagcggcgaggatacttggcccggctttccc
gatgcactgggtaagcaagcccattgtgtagagcttgatgtggttaaggtcgagacgaaa
ctaagggttaaagaaggccttgtttcgggtgcggctcggggaggtgtgagtaatggtaaa
gccacccaagggctttcgccatcgcacaaggaagcttctacgcaaacacatccgtga
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