Pyrolobus fumarii: Pyrfu_0387
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Entry
Pyrfu_0387 CDS
T01620
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pfm
Pyrolobus fumarii
Pathway
pfm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Pyrfu_0387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfm03019
]
Pyrfu_0387
03009 Ribosome biogenesis [BR:
pfm03009
]
Pyrfu_0387
04131 Membrane trafficking [BR:
pfm04131
]
Pyrfu_0387
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfm04147
]
Pyrfu_0387
Messenger RNA biogenesis [BR:
pfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Pyrfu_0387
Ribosome biogenesis [BR:
pfm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Pyrfu_0387
Membrane trafficking [BR:
pfm04131
]
SNARE
SNARE associated proteins
Others
Pyrfu_0387
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Pyrfu_0387
Exosome [BR:
pfm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pyrfu_0387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_14
AAA_5
AAA_22
TIP49
AAA_33
Vps4_C
nSTAND3
IstB_IS21
AAA_28
AAA_18
RNA_helicase
Mg_chelatase
AAA_25
AAA_24
ATPase_2
NPHP3_N
AAA_17
AAA_3
TsaE
ABC_tran
AAA_lid_PRS2_C
DUF815
AAA_7
NACHT
NB-ARC
Parvo_NS1
Bac_DnaA
DUF1905
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
AEM38259
UniProt:
G0EFT8
LinkDB
All DBs
Position
complement(351703..353934)
Genome browser
AA seq
743 aa
AA seq
DB search
MPETREVRLRVAEARSKDVGRKIARIDRRTMRQLGVEVGDFIEIEGPKGTAVAQVWPLPP
DEEGKSIIRIDGYIREAIGVGIGDYVTVRKAKVQPAIRVVLAPTERIPVSRDFVEYVKEF
LLRRPVTRGEVVIIPFFGSALRLVVVSTQPGQAVYITEQTEVELREEPVKEEQVRRKIPR
VTWEDIGDLEEAKERIREIVELPLKHPELFKHLGIEPPKGILLYGPPGVGKTLLAKALAN
EIGAYFIAINGPEIMSKYYGESEQRLREIFEEAEKNAPAIIFIDEIDAIAPKREEVTGEV
EKRVVAQLLTLMDGLKERGKVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDKRARKEI
LLVHVRNVPLCDEQKVKEGLCSPGDVVDLDRIAEMTHGYTGADLAALVKEAAMNALRRFI
KSGQIDLNKPIPTETLRKLVVTMKDFLDAMKVIQPSLIREIYVEVPEVHWDDIGGLEDVK
QQLREAVEWPLKHPEVFESMGIRPPKGILLFGPPGVGKTLLAKAAATESGANFIAVRGPE
ILSKWVGESEKAIREIFRRARQVAPTIIFFDEIDAIAPARGMRHDTSGVTDRIVNQLLTE
MDGIVPLQNVVVIAATNRPDILDPALLRPGRFDRLIYVPPPDKKARLEIFRIHTRKMPLA
DDVDLEKLAEMTEGYTGADIEAVCREAAMIALREAIQKGQGLKPQPVRMEHFLKALKAVP
PSLTREDILRYERLARELKRMVI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagacgagagaagtccgcctccgcgttgcagaggcgcggtcgaaggacgttggc
aggaagatagccaggattgataggcgtacgatgaggcagcttggcgtcgaggtcggggac
ttcatagagattgagggtccaaagggtacggctgtggcgcaggtctggccgctgccgcca
gacgaggagggcaagagcatcataaggatagatggctacatacgcgaggctattggcgtg
ggcatcggggactacgtgactgtcaggaaggctaaggtgcaacctgctatccgtgttgtc
cttgcccccacagagagaatacccgtatcccgcgacttcgtcgagtacgtgaaggagttc
ctccttaggcgcccagttacccgcggagaggtcgtcatcatacccttcttcggctctgca
ctacgcctggtcgtcgtctcgacgcagcctggccaggctgtctacatcaccgagcagacc
gaggtggagctgcgcgaggagcctgtgaaggaggagcaggtgcgcaggaagataccgaga
gtaacctgggaggatatcggcgaccttgaggaggcaaaggagaggatacgcgagatagtc
gagctgccattgaagcacccggagctcttcaagcaccttggtatcgagcctccgaagggt
atcctgctctatgggcctcccggtgtaggcaagacgctactcgcgaaagcacttgctaac
gagattggagcctacttcattgctatcaacggcccggagataatgagcaagtactacggc
gagtccgagcagaggctacgcgagatattcgaggaggccgagaagaacgccccagcaatc
atcttcatcgacgagattgacgcgattgcaccgaagcgcgaggaggtaacaggcgaggtc
gagaagcgtgttgtcgcccagctcctaaccctaatggatggcctcaaggagcgcggcaag
gtcatcgttatcggcgctactaacaggccggacgccattgacccggcgcttaggaggccc
ggcaggttcgacagagagatcgagatcaggcctccagacaagagggcacgcaaggagata
ctcctggttcacgtgaggaatgtgcccctctgtgacgagcagaaggtcaaggagggccta
tgcagccctggcgacgtggtagacctggataggattgccgagatgacgcacggctacact
ggcgccgacctagcagcactcgtcaaagaggccgcgatgaacgcgctaaggaggttcatc
aagagcggccagatagatctcaacaagccgatacccaccgagaccctccgcaagctcgtc
gtgacaatgaaggacttcctcgatgcaatgaaggtgatacagccgagcctcatcagagag
atctatgttgaggttcctgaggtgcattgggatgatattggtggtcttgaggatgttaag
cagcagcttcgtgaggctgtggagtggcccttgaagcacccagaggtattcgagtcgatg
ggtattcgtccgccgaaggggattctgctcttcggcccgccgggtgtcggcaagaccctg
ctcgcgaaggccgctgcaaccgagagcggcgccaacttcatagccgtgagaggcccagag
atactctcaaagtgggtaggcgaaagcgaaaaagcaatacgagagatattcaggagggcg
agacaagtagcaccaaccatcatcttcttcgacgagattgacgccattgcaccagctagg
ggcatgaggcacgacactagcggcgtgacggacaggattgtgaaccagctgcttaccgag
atggacggcatcgtgccgcttcagaatgtggttgtgattgctgccactaacaggccggac
atcctagacccggcgctgctcagaccaggcagattcgaccgtctcatctatgtgccaccg
ccagacaagaaggcgaggctagagatctttaggatacacactaggaagatgccgctggct
gacgacgtggacctagagaagcttgccgagatgacagagggctacacgggcgctgacatt
gaggctgtgtgccgtgaagccgcaatgatagcgcttagggaggctatccagaagggccag
ggtctaaagccgcaaccagtgcgcatggagcacttcctcaaggcgctgaaagcagtgccg
ccgagcctaacgagagaggatatactccgctacgagaggcttgcgagagagctcaagagg
atggtcatctaa
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