Pyrolobus fumarii: Pyrfu_0780
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Entry
Pyrfu_0780 CDS
T01620
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pfm
Pyrolobus fumarii
Pathway
pfm03022
Basal transcription factors
pfm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pyrfu_0780
09124 Replication and repair
03420 Nucleotide excision repair
Pyrfu_0780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfm03021
]
Pyrfu_0780
03036 Chromosome and associated proteins [BR:
pfm03036
]
Pyrfu_0780
03400 DNA repair and recombination proteins [BR:
pfm03400
]
Pyrfu_0780
Enzymes [BR:
pfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Pyrfu_0780
Transcription machinery [BR:
pfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Pyrfu_0780
Chromosome and associated proteins [BR:
pfm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Pyrfu_0780
DNA repair and recombination proteins [BR:
pfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Pyrfu_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AEM38649
UniProt:
G0EDG4
LinkDB
All DBs
Position
complement(724914..726815)
Genome browser
AA seq
633 aa
AA seq
DB search
MSNAGKQENVRFPYDRFRRGQREVAEVVKRVVERGEVLLLRAPTGFGKTAAVIYGLLLAG
VERVLYLVRTRNEIEPVLRELSRFGVDYVFLYSARRMCPLLRGERGEAPPPDEFWENCRL
ARLKGVCPYYENLVQMGDVKGPVINAVRRVAPSPYAAVRELEKLGLCPFFALKMLVDDVK
FIVATYPYVFKRDIFESVFEPHEYSDYVIVVDEAHALMDVSSILEERLRRRDVEAFAAEV
ERYAPDSEWGRTVAARLRSILAKLKPPPEGRLRRINKTIVLRAVEDPGALADLAAEIRLE
KFREALGGGASSAARIRVAATRVAVFASLVSLEGVEVFVTRGKSGEAELVALPVDHCVVT
REPLMNAKAVILMSGTLPPERFIRDVLCVERRSVSIDTELLYGSNISGKYYTIVTLELTS
RYGERSGEMYNMYASYVKTLAEELRGAILVVYPSYEFMKEIVSRLSSNVVMVSEERDTNI
DALRKEVEKLLEKHRVVVVNAVAGGKLVEGVELTRDGRSLISAVMLAGVPYPQPDDYTKA
VIEKLAEKVGPVQASYYVYTVTAYVKARQALGRAIRSDEDRAIYILGDRRYLNPRIRELL
RLKYHRVVKSIEELREALRVAVRRLWDTSVHIQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacgctggcaagcaagagaacgtgaggttcccgtatgataggttccgccgaggg
cagcgcgaggtagccgaggttgtaaagagggttgttgagaggggcgaggttctactgctg
agggcgccgacgggcttcggcaagacggctgcagtgatatacgggctgctcctggctggg
gtagagcgcgtgttgtatcttgtgaggacgcgtaacgagatagagccggtgcttcgcgag
ttaagccgcttcggtgtcgactacgtcttcctctatagtgctaggaggatgtgccctctg
ctgcgcggggagcgtggcgaggcgccgcctcccgacgagttctgggagaattgccgcttg
gcccgcttgaagggcgtctgcccctactacgagaacctagtccagatgggtgatgtgaaa
ggccctgtaatcaacgcggttaggagggtcgctcctagcccgtatgccgctgtacgggag
ttagagaagctgggactatgtccattcttcgcgctcaagatgctagtggatgatgtgaaa
ttcatagtagcgacgtacccttatgtcttcaagcgtgacatcttcgagtctgtgttcgag
ccgcacgagtacagcgactatgtcatcgtcgtggatgaggcgcatgcattgatggacgtt
agctcgatactggaggagaggctgcggaggcgcgacgtggaggcattcgccgccgaggtt
gagaggtatgcaccggactccgagtggggaaggacggtcgctgccagactccgcagtata
ctagctaagctgaaaccgccccccgagggccgcctacgccgcataaacaagaccatcgtt
ctccgtgccgttgaggatcctggtgcattagcagacctagctgccgagattcgactcgag
aagttcagggaagcacttggcgggggtgcgtcgagtgcagcacgcatacgtgtcgcggcg
acgagggttgccgtcttcgcgtctctagtgtctctcgagggtgtagaggtgttcgtcact
aggggtaagagtggcgaggcagaactagtagcgctgcccgtagaccactgtgttgtgacc
agagaaccgttgatgaacgcaaaggctgtgatactgatgagcgggacgctgccacccgag
aggttcatcagggacgttctttgcgtcgagaggcgtagcgtaagtatagacaccgagctg
ctctacggatccaacatatccggcaagtactacacgattgtgacgctcgagttgacgtca
cgctacggggaacgcagcggcgagatgtacaatatgtacgcctcgtacgtgaagacgctg
gcggaggaactgaggggcgccatactagtagtctatccgagctacgagttcatgaaagag
attgtatcgaggctctctagtaacgtggtgatggttagcgaagagagggatacaaacatt
gatgctttgagaaaggaggtggagaaactcctagagaagcatagagtggtggtagtgaat
gctgtggctggagggaaactcgtggaaggagtagagttgacccgtgacggtaggagtttg
ataagcgctgttatgctggctggcgtcccgtacccgcaacccgatgactacacaaaggct
gttatagagaagcttgcagagaaggttggtccggttcaggccagttactacgtatacact
gtcacggcttacgtgaaggccaggcaggcgctgggtagagcaatacgtagcgacgaggat
cgcgcaatatacattctcggggaccgtaggtacctcaatcctcgtatccgcgagctactc
aggttgaaataccacagggttgtcaaaagcatagaagagttacgtgaagctctgcgcgtg
gccgttaggagattgtgggatacgagtgtgcacatccagtaa
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