KEGG   Pyrolobus fumarii: Pyrfu_0966
Entry
Pyrfu_0966        CDS       T01620                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pfm  Pyrolobus fumarii
Brite
KEGG Orthology (KO) [BR:pfm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfm03400]
    Pyrfu_0966
Enzymes [BR:pfm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pyrfu_0966
    5.6.2.6  RNA 3'-5' helicase
     Pyrfu_0966
DNA repair and recombination proteins [BR:pfm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Pyrfu_0966
SSDB
Motif
Pfam: DEAD Helicase_C DEAD_assoc Lhr_WH ResIII AAA_25 AAA_19 HEM4 nSTAND3
Other DBs
NCBI-ProteinID: AEM38835
UniProt: G0EEL3
LinkDB
Position
complement(914556..917381)
AA seq 941 aa
MPSPIEMLNEKIRKLLEEKGWTKLTEIQEKAIPEIMAGKNVIITAPTGYGKTEAALLPIL
SMMSSSNVEPVALLYITPMRALINDLYLRISWWAERLGFRVARKHGDVSQSERSKRLRKA
PHILITTPESLEIDLDWATRFREYYRNLRWVIVDEVHEIVGTKRGVQLALLLSRLRRYAG
DFQLVLISATVGDPMKVLEVFSYGSKRERSVVSVARRKKIEIVIDVIGNDRNYWRRAAEK
IAKYLEPITLVFTNSKYASERLHEELVKLGVKDVLVHHASLSPEEREEAEKALREGKVTA
VICTKTLELGIDVGDVKKVILFRPPSTVFSLVQRLGRSGHRHDIEVLNGVIIANDAVEAL
YAAALTKAAVEGRVEEPRIPEKPLDVLVKELVGMALQGEVNIDEAYEIFKSTYHYRNLTR
EELDEVVKLLIDNGILQESGPGRVKVGQLFYKIWRFEKTSDRRAWWMKSFSSFFSTIGEK
STYSVRTEDGRIVGELDASYVYKLYPGAAIRLGGRTWVIVAIDELAAKIIVREEKATTAI
VPVWRGLGPEASHTALEALDKVLKEVYERGIDAITWVKLSEDARREVEKFIEEYRVSKKP
LPSRDRVIIEQVGDELIILGLMGEAAARTLGYALLYAARSYTSSIRTSYYGLSIRITPGF
NPLEVLSQIKPDDIENLALEAIMKTPYYLNTLRDIRLAFGQISKMGPEDNLVKLEAARQA
LQEFFDVTEAKRILKLVHEGHVSTHTAGAASPLARLLISMPEEKLWKVDIEKELAEALKG
MAFTVEELASMTGLPEKIVEAKLREMRKPGSPYRVFQFIDVDTGDWRWALEEDVEEIVGL
EEFRDSFKPLKLNEHFVLMVRGVNSEDFAHVLISARDVVEKREEFLRQVPFNEIYELKVL
PITDDSKAGIPRYYYVSRRTLPYVVLNAIAVIQRIRSLDYY
NT seq 2826 nt   +upstreamnt  +downstreamnt
ttgcccagcccgattgagatgctcaatgagaagattcggaagctactcgaagagaagggc
tggactaagctcactgagatccaggagaaggccataccagagataatggcaggcaagaac
gtgataatcacagcacccactgggtacggcaaaactgaggccgcgttactccccatacta
agcatgatgtcctctagcaacgtcgagccagtagcactgctctacataactcccatgcgc
gcactgattaacgacctatacctgcgcataagctggtgggccgagcgtctaggattccga
gtggcaaggaagcacggcgacgtatcccaaagcgagaggagcaagaggctacgcaaagca
ccacacatcctaataactacgccggagagcctcgagatagaccttgattgggctacgcgc
ttcagagaatattaccgcaacctacgttgggttatcgtcgacgaggttcacgagatagtt
ggtaccaagaggggcgtacaactggcactcctcttgtcaagactgcgccgctacgctggc
gacttccagctcgtgctcatctcggcgactgtaggcgacccgatgaaggtgctagaggtg
ttcagctacgggtctaagagggagaggagtgtcgtaagcgtagccaggcgtaagaagatt
gagattgtgatagacgtcattgggaacgatcgtaactattggaggcgcgctgccgagaag
atagcaaagtatctcgagccgataacactggtcttcaccaactcgaagtatgcctccgag
aggcttcacgaggagcttgtaaagctaggcgtgaaggacgtcctagtacaccatgctagc
ttgtcgccagaggagagggaggaggccgagaaggctctacgcgagggcaaggtaactgcc
gtcatatgtacgaagactctcgagctgggcatagatgttggcgacgtgaagaaggttata
ctattccgcccgccaagcaccgtgtttagccttgtacagaggctcggtaggagcggccat
aggcacgacatagaggtgttgaacggcgtcataatagctaatgacgccgttgaggctcta
tacgcagctgcactgacaaaggctgccgtggagggcagagtcgaggagccacgcatacct
gagaagcctctagacgtcctagtgaaggagcttgtaggcatggcgcttcagggcgaggtc
aacatagacgaggcctatgagatattcaagtcgacctaccactatcgcaacctaacgcgc
gaggagctcgacgaggttgtgaaactgttgatagataacggtattctccaggagagcggc
cccgggcgcgtaaaggtaggccagctattctacaagatatggaggttcgagaagactagc
gaccggagagcatggtggatgaagagcttctcatccttcttctcgaccataggcgagaaa
tcaacgtacagcgtgagaaccgaggatggtaggatagtcggcgaactcgacgctagctac
gtgtacaagctgtacccaggcgccgctataaggctaggaggccgtacgtgggtaatagtt
gccatcgacgaacttgcagccaagatcatagtgagggaggagaaagccacaaccgccata
gtacctgtatggcgcggtctaggccccgaggcatcccacaccgcacttgaggcactcgac
aaggtgctcaaggaggtttacgagaggggtatcgacgcaataacctgggtcaagttgagc
gaggatgctaggagagaggtggagaagttcattgaagagtaccgcgtctctaagaagccg
ttaccaagccgcgaccgcgtgataatcgagcaggttggcgacgagctgataatcctcggg
cttatgggcgaggctgcagcccgtacgttaggctatgcactcttatacgcggctcgcagc
tacacctccagcatacgcacatcgtactacggcctatccatacgcatcacgccaggcttc
aacccattggaggtgctcagccagataaagcccgatgacatcgagaacctcgcactagag
gctataatgaagacgccctactacctcaacacactgcgagacataagactggcgtttggc
cagatatcaaaaatgggtcccgaggataatctcgtgaagctcgaagcagctagacaagca
ctgcaagagttcttcgatgtcaccgaggcgaagagaatactcaagctagtacacgagggc
cacgtgtcaacacacactgctggcgctgcctcgcccctagcgaggctcctaatctcaatg
ccggaggagaagctatggaaagtcgatattgagaaggagttagcagaggcgctcaaaggc
atggcattcacagtcgaagagttagcatctatgactggcttgcctgaaaagatagtcgag
gctaagctgcgcgaaatgaggaaacccgggtctccctaccgcgtcttccagttcattgat
gttgacactggagactggaggtgggcccttgaggaagacgtagaagagatagtaggcctt
gaggagttccgcgacagcttcaaacccctaaaactaaacgaacacttcgtgctgatggtg
agaggagttaactccgaggactttgcacacgtgctcatctctgccagggacgtggtagag
aagcgggaagagttcctccggcaggtaccattcaacgagatttacgagctgaaggtgctg
ccgataaccgatgacagcaaagctggcataccacgctactactacgtctcgaggcgcaca
ctgccatacgtggtgctcaacgctattgcagtaatccagaggatacgctctctcgactac
tactag

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