Pyrolobus fumarii: Pyrfu_1550
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Entry
Pyrfu_1550 CDS
T01620
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pfm
Pyrolobus fumarii
Brite
KEGG Orthology (KO) [BR:
pfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfm03400
]
Pyrfu_1550
DNA repair and recombination proteins [BR:
pfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pyrfu_1550
Archaeal homologous recombinant proteins
Pyrfu_1550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
AAA_13
Baculo_PEP_C
NPV_P10
GAS
AAA_21
ATG17_like
AAA_15
AAA_29
ABC_tran
FapA
DUF1664
SbcC_Walker_B
AAA_27
FlaC_arch
BLOC1_2
DUF5082
EzrA
TPR_MLP1_2
OmpH
CCDC93_CC
DUF4618
CENP-F_leu_zip
Uds1
HSBP1
Laminin_II
Golgin_A5
COG6_N
DUF4200
MukB
DUF6011
AAA_16
RsgA_GTPase
Crescentin
APG6_N
Spike_torovirin
COG3_N
Occludin_ELL
MMR_HSR1
DUF3450
Motif
Other DBs
NCBI-ProteinID:
AEM39407
UniProt:
G0EHQ4
LinkDB
All DBs
Position
complement(1449031..1451757)
Genome browser
AA seq
908 aa
AA seq
DB search
MIIRGVELINFLSHRHTRLEFDTGIVAIVGPNGAGKSSIIDAITFALFDFHNRGKSNKHL
VRLGASYALIRVWFEVGGKRFLVERKLDASGRTQSAILVEELGNTRRLLARDVRSVVAEV
EKLLGVRKEVARVAFIAQQGELAEIIESSRRKEYVNRLLGLDAIEKAYEKIRFVLREWQL
RERQARDVLKFLENELKRIKERMEELKGVEEEFERLQRELEAAKREVERIKNERSRIEDK
VKELEAKSYILESKREELKRLESEKADVLERLATIEDSIAELAEYESVAAHLNLLREAVN
TANELRSIAKRMESLKRRIEEYEQIRKEYEELRSELSEYEKMREAYEKAVSLEERVRSLR
ERLQNLRKHREDLQQKLRDIEQNIAAMARKLLNIRAGVVIDIGEVVSRLASMEEQLKSRI
DSMRARIDSLTRERGNIESKIHDIEENIVKLASAHGRCPLCSRPLRDEERRDLIRKLRFE
KEALREKLERIRSELAKLRVEVEKLEKMLREYSEYKSRLAMLMGYYEQLKGELSRVEKEL
RDIEEQLKESNLELMRLREVMEKYRILEEKRARLQALEGKLETLSVLREEYEELEAQALS
LYERLEDISDRLGVSLDKLIEIDEDTVSAIEEKIRMLEKLRNERDQLRALLEQYDTRINV
LREEIAKLEQDIQPLESLKARLEELRKAERELEDYIMRLNQEIGAAEQKLKEYKRLEKQH
EEYEKEIEKRRAEYEKISRFVRDLERVKNALSPQGLPRLIRILARSMIERHVREILARFN
IEFVDVKITDDYDVILVTRYGEKNFRMLSGGEKTALALAFRIAFARVLAGRGRVNTLILD
EPTMYLDEHRKRELVNILRYGWHGGGKILPQLIIVTHDREIEDAADQVIEVDKSSSGESR
VKIVTPLA
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgataatccggggtgtcgaactgataaacttccttagccaccgtcatactagactcgag
ttcgatacgggtatagtcgctatagttgggcctaatggtgctggcaaatctagcataatc
gatgctataaccttcgcgcttttcgactttcacaaccgcggcaagagcaataagcacctt
gttagacttggcgcctcctatgcacttattcgtgtatggttcgaggtgggtggcaagagg
tttctcgttgaacgtaagttagacgctagcggtagaacacaaagcgctatcctagttgaa
gaactgggaaacacgaggaggctactggcacgtgacgttaggagtgtagtagctgaggtt
gagaagctcctcggcgtacgtaaggaggttgcaagggttgcattcatagctcagcaggga
gaactcgcagagataattgagagtagccgtcgcaaggagtatgtgaatagactgctagga
ctcgatgccattgagaaagcatatgaaaagatacgcttcgtactacgtgaatggcagtta
cgcgagcgccaagctagggacgttctaaagtttctcgaaaacgagctgaaacgcattaag
gagcgtatggaggagctgaaaggagtagaagaggaatttgagaggcttcagcgtgaacta
gaagcagcaaagagagaagttgagaggattaagaacgagaggtcaagaattgaagataag
gtcaaagagctggaagcaaaatcgtacatactcgagtctaagagggaggaactcaaaaga
cttgaaagtgaaaaagcagatgtgctcgagagactcgccactatcgaagatagtatcgca
gagctggcggagtatgagagtgtcgctgcacacctaaacctccttcgagaggctgttaac
accgccaacgagttacgctctatcgcgaaacgtatggagtctttaaagagacgaatcgag
gagtatgagcagattcgcaaggagtacgaggaactgaggagcgagttatcagaatatgag
aagatgcgtgaagcgtacgagaaggccgttagccttgaggagagagtacgctctctccgc
gagaggttacagaatctacgaaaacacagagaagacctgcaacaaaaactgcgagacatc
gaacagaacatagcagctatggcacgcaaactcctcaacataagagctggcgtagttatc
gatatcggtgaagtcgtatccaggctggccagtatggaggagcaactgaagtcacgtatt
gattctatgcgggctcgtatcgattcattaactcgtgagagaggcaatatcgagtcaaag
atacacgatatagaggagaatattgtgaagcttgcatccgcacacggtcggtgcccactc
tgcagtaggcctttacgagacgaggaaagacgtgacctcatacgtaagctgcgattcgag
aaggaggcgcttagagaaaagctggagagaatacgctctgaactcgccaagctgagagtt
gaagtggaaaagctagagaagatgctgagagagtacagcgaatacaagagcagactagct
atgctgatgggttactatgagcagctgaagggcgagcttagccgcgtagagaaggagcta
cgcgacatagaagagcaattgaaagagtctaatctcgagttgatgagattgcgagaagtt
atggagaagtaccgtatacttgaggagaagagagcgcgcctacaagcattggaaggcaag
ttagagacactaagtgtcctccgcgaagagtacgaggaacttgaagcacaagctctatcg
ttgtacgagaggctcgaggatatatccgatagacttggagtcagtcttgacaaactcata
gagattgatgaagataccgtctctgccatagaagagaaaatccggatgcttgaaaagcta
aggaacgagcgagaccagttacgcgctctactcgaacagtatgatacacggataaacgtt
cttcgagaagagatagctaagctcgaacaagatattcagccattagagtcgttgaaagct
aggcttgaggagcttcgcaaagcagagcgtgaattagaggattacatcatgcggttaaac
caggagatcggagccgccgagcaaaaactgaaggagtacaagaggttagagaagcaacat
gaagaatatgaaaaagagattgagaaacgacgcgccgagtatgagaagatatcaagattc
gtgcgtgaccttgaacgcgtaaagaacgcacttagcccacagggtctaccacgacttatc
aggatacttgcacggagcatgatagagaggcatgttagagaaattctagccagattcaat
atcgagtttgtggacgtcaagataactgatgactacgatgttatactggtaacgcgttat
ggcgagaagaacttccgcatgctgagcggtggcgagaagaccgcattggcacttgccttc
cgcatcgcatttgccagggtactggcaggccgcggcagagtcaatacactgatactagac
gagccgacaatgtacctcgatgaacatcgtaaacgcgaactagtcaacatactgaggtat
ggctggcacggcggtggtaagatactaccacaactcatcatagtcacgcatgatcgcgaa
atcgaggatgcagccgaccaagtgattgaagttgataaaagctcatcgggcgagagccgc
gtcaagatagttactcctttagcctag
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