Pyrolobus fumarii: Pyrfu_1552
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Entry
Pyrfu_1552 CDS
T01620
Name
(GenBank) HerA-ATP synthase with barrel domain
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pfm
Pyrolobus fumarii
Brite
KEGG Orthology (KO) [BR:
pfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfm03400
]
Pyrfu_1552
DNA repair and recombination proteins [BR:
pfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Pyrfu_1552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
HerA_C
HAS-barrel
TrwB_AAD_bind
FtsK_SpoIIIE
AAA_10
Ntox43
Motif
Other DBs
NCBI-ProteinID:
AEM39409
UniProt:
G0EHQ6
LinkDB
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Position
complement(1452914..1454413)
Genome browser
AA seq
499 aa
AA seq
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MEERPLGYVLDGATPVRATFVSSEPPKLGDYVVIRSTGIELLGFVENIGAKSVMLATTHS
VKEPSFIQRLNELRLNGDTFFEARVRIVGDVNDPEFRNPRIPPPPGAPVYPAPRELLERI
FGPGSRGYIRLGVLAARPDVPVYVDVNKMVTRHLAILAVTGAGKSNTVAVITDRIVRMGG
TVLILDFHGEYVESDIGGGRVNVIEPRLNPRHLNIAELMILLGIESRYYHQERILRKAYA
RARESNEAFLDALRRAVEQLRGKEEPKALAAVLNKIEGLIERYRDILDEEAGDMLSRLRP
GFANVLDLSRVDEDAADVIASHMLRRILQARKAHRVTGNGLPYPIFIVVEEAHILAPKDE
DTLSKYWLARIAREGRKFGVGLCLVSQRPKNLDPDILSQANNKIILRIVEPSDQRYVQMA
TETLSDDLLEQLPSLNTGEAIVLGPMVRMPTLVRIDLYEGRKGGTDPDVVGEWLTAREMH
QEHSQDPVLDLIEELTMKR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtggaggagcgaccccttggctatgtgctcgatggcgcaaccccagtgagggctacattt
gtctcctcggagcccccaaagctcggagattatgttgtcatacggtctaccgggatagaa
ctgctggggttcgttgagaacattggagcaaagagtgtgatgcttgccactacacactct
gttaaggagcctagctttattcaacgcctaaacgagctaagacttaacggcgatactttc
ttcgaagcgagagtaaggatagtcggcgatgttaatgacccggagtttaggaatcccagg
atacctccgcctcctggcgccccagtttaccccgcgccacgcgagctactagagaggata
ttcggacctggcagcagaggatacatacgtctcggcgttctcgcggcacgacccgacgtg
cccgtctatgtggatgttaacaagatggttactagacaccttgctatactggctgtgacg
ggcgccggcaagagtaacactgtcgccgtgataactgatcgtatagtgcgcatgggcggt
acagtactcatactagacttccacggtgaatatgtcgagagtgatattggaggtgggcga
gtcaacgtcatagagcctaggttgaatccacgccacctcaacatagccgagctcatgata
ctcttggggatagagtctaggtattatcaccaggagcgcatcctccgcaaggcgtacgcg
agagcacgtgagtctaacgaggctttcttggatgcacttcgcagggctgtcgagcaacta
agaggcaaagaagagcctaaggcactcgcagctgtcctcaacaagatagagggtctcata
gagaggtatcgcgacattctcgatgaggaagccggcgatatgctgtctaggcttaggccg
ggtttcgctaacgtcctagaccttagcagggtagacgaggacgcagccgacgttatagcc
agccatatgctgcgacggatactccaggctagaaaggcgcaccgcgtcacggggaacggc
ctaccatatccgatattcattgtcgtcgaagaggctcacatactagcgcctaaggatgag
gacactctatctaagtactggttggccaggatagcgagagagggtagaaagttcggagtc
ggcctctgccttgttagccagagaccaaagaacctcgatccggatatactaagccaagct
aacaacaagataatcctccggatagtcgagcccagcgaccagagatacgtccagatggca
accgagactcttagcgacgacctcctggagcaactgccgagcctcaataccggcgaggct
atagtgctaggcccaatggttaggatgccgactcttgtacgcatagacctctatgagggt
aggaagggtggcaccgatcctgacgtggttggagagtggcttactgccagagaaatgcac
caggagcacagtcaggacccggtcttggatcttatagaggagcttacgatgaagaggtga
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