Pyrolobus fumarii: Pyrfu_1608
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Entry
Pyrfu_1608 CDS
T01620
Name
(GenBank) DNA mismatch repair protein MutS domain protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
pfm
Pyrolobus fumarii
Pathway
pfm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Pyrfu_1608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfm03400
]
Pyrfu_1608
DNA repair and recombination proteins [BR:
pfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Pyrfu_1608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
HHH_5
HHH_2
AAA_21
ABC_tran
IMS_HHH
AAA_14
HHH_8
AAA_16
AAA_29
AAA
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AEM39465
UniProt:
G0EC95
LinkDB
All DBs
Position
1499000..1501144
Genome browser
AA seq
714 aa
AA seq
DB search
MVLFAAGNVGKLSDIPGVGPRIAEKLVEYFGDEEEALQAILSCRISLISEAIGRAAATRL
VHGLYRALFGAWPRDVAANDDAWKLFQAAKGVILKKVSSPAGRDVLACFLPMPSTGVKEA
KRRLTLVKSLQEAIRELPRESIEALRSALSKLEWPKPVKISRIKRTLIIIGDNVAYEKAK
RTLSNLVDIVLVNDADEVDRVAAERGEALVYDPDGVYAGPLPRVLELSVAEVVPEAIVEY
FRVNWRVIEAVVDALEALGRWAPDILKIVGLDFDPTRVLNRLREALVFKGGEVAPDIDPE
YQRLYTALTNLDRVVDEIELWVNNEVQTRLEKLEVRLSAAQFLRLFRVLREGGVEGVDLP
EEIYEVFEEVAEEAEKRVVEKLHLTPDEAEAMRGLVPRTPLFPIELNRDKVEELRRVLRA
KLSVKRFEVMQKLASKLVGVKAKLERLVDALALLDVLLAQVELVGDGVAGVPEVSSEYLG
VGFVDAIEASLVGKPNVQRISYVVGSTPYKPDDTKGERVVLLTGANSGGKTTLLKTICET
ALLAQSGLVVLARQAWIGAFDYVHFFSKPSGMVDAGALEATLRILAAIVAGGSGRRLVLV
DELEAATEAGAAARIMSVVVEKLCSRDNIVAVIVTHMAREILSNVKKVEGCIRVDGIEAR
GLDENYNLIVDRNPRYYYLARSTPELVVRRLLYRAKGREEREFYETLLRVLSGA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcttcgcggccggcaatgtaggaaaacttagtgacatacccggtgtcggcccc
cgtatagctgagaagctcgtagagtacttcggggacgaagaggaggcccttcaagccata
ctatcatgtcgaatatcgctaatctccgaggccatagggcgtgctgccgcaacgaggctc
gtgcatggcttgtatcgtgctctgttcggtgcatggcctagagacgtagccgcgaacgat
gatgcttggaaactcttccaggcagctaagggggttatactcaagaaggtgtcaagtcct
gccggacgcgatgtattagcgtgtttcctcccaatgccgtccacgggggtcaaggaggcc
aaacgacgattaacccttgtcaagtcgctacaagaggccatacgcgagctgcctcgtgaa
agcatcgaggcactcaggagtgccttatcgaagctcgagtggcccaagccggtaaaaatt
agtcgcataaaacgcacgttgataataattggtgacaacgttgcatacgagaaggcgaag
agaacactctccaacctcgttgatatagtattggtaaacgatgctgatgaagttgataga
gtggctgctgagcgcggcgaagcgctcgtctatgacccggatggcgtgtatgccggtccg
ttaccacgcgtgctagagctaagtgttgctgaagtggtgcccgaggctatagtcgagtat
ttccgtgtaaactggcgtgttatagaagctgttgtagatgctctggaggctttggggaga
tgggcgccagatatcctcaagatagttggtctagactttgacccgacaagggtactgaat
aggctcagagaggcgctcgtgtttaaaggcggcgaggtggcgccggacatcgaccctgaa
taccagaggctatacactgcgcttacgaaccttgatagagttgttgatgagatcgagctg
tgggtcaataacgaggtgcagacgagacttgagaagctggaagtgagacttagcgcagcg
caatttcttagactgtttcgtgtactacgtgagggtggtgtcgaaggtgtggatcttcca
gaggagatatacgaggtgtttgaggaggttgctgaggaggcagagaagagggtagtagag
aagctgcatcttacaccggatgaagctgaggctatgaggggtctagtgcctcgaaccccg
ctattccctatcgagctgaaccgcgataaggttgaggagcttaggagagttcttcgtgca
aagttatctgtcaaacgttttgaagttatgcagaagcttgcatctaagctagttggtgtg
aaagcaaagttagagagactcgttgatgcgttggctcttctagacgtgttgttggcacaa
gtagagcttgtcggggatggggttgctggtgtgcctgaagtctctagcgagtatctgggt
gttggttttgttgatgcgattgaggctagtctggtaggaaagcccaacgtccagaggata
agttatgtggttggttcgactccttacaagcccgatgatacgaagggggagagggttgta
ctgctaacaggtgctaatagcggcggtaagacgacactactaaagacgatatgtgagacg
gctctcctggcgcaatccggtcttgtggttttagctcggcaagcgtggataggggcattt
gactatgtgcatttcttctcgaagccgagcggtatggttgacgcgggcgcgttagaagcc
acactacgcatcctggctgccatagtcgcaggtggtagcggtagaaggcttgtacttgta
gatgagcttgaggctgctacggaggcgggtgcagcggcaagaataatgagtgttgtcgta
gagaagctctgtagccgcgataacattgtagctgttatagtcacgcacatggctcgcgag
atactgtccaacgtgaagaaggtagagggatgcatacgcgttgatggtatagaggcgcgc
gggctagacgagaattacaacctcatagttgatcgtaacccgcgttactactacctcgcg
agaagcacgccagagcttgtggttagaaggctgctctaccgggctaagggaagagaagag
cgagagttctacgagactcttcttagggtgctctcgggggcctag
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