Pseudomonas fluorescens UK4: HZ99_00105
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Entry
HZ99_00105 CDS
T03319
Name
(GenBank) lipopolysaccharide biosynthesis protein
KO
K20998
polysaccharide biosynthesis protein PslE
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HZ99_00105
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Gene cluster
GFIT
Motif
Pfam:
GNVR
Wzz
DUF8197
Motif
Other DBs
NCBI-ProteinID:
AIG00668
UniProt:
A0A379IBY5
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All DBs
Position
complement(24703..26682)
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AA seq
659 aa
AA seq
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MIEIRSLRDLLRLFFIFRREFKLAVITTIVVAVLGAFLLPARYESDARLLVKPGRDNTTL
PIEAANRQTLIAPSTQHDPIVDEEKMLTGRPIVHIVAERYLAMTSEPPQGFWKVTKFYVK
KAAGEVLDVVRSVLQFVGLAEKQSPLERLATKLEKNFEAGHEPGSSVIEISFTWDDPVIA
QKVVETWVNAYLEERARILGRKSLHTFYEAERTKVATNIQGLKDELQGRLKQIDSISVDA
RLKNLTNQIDRVTDAKVSAQNQIAGIRSFLANASQQIKSQPAEVVTARETSLNPTQLDLK
RQLNALQVERARLLRTYLPGTPQVNQIEQNIRDMEALSAQEATRLERSQNTAPNSLVINV
KQQIIDAQLQERKLAGEIENYDKTLAELRAQRDQAMTDEPELNKLTQQLRTAEKSYALYS
ENLEQARIDHELDSSQISNIALIEHATLNPARVFPKSLLILLFTIPAGLAVGLLTIYVLY
LLDQRIHDGARLQEVFGVPLWSSIPDVQHATPAALTASIYRLYSLLPAERIASDGFALGL
TSARHGEGVSFIIEQLKRLLEERGHRVTVNGTQAAQPGEVLLLDASALSSNPQAFLTLRR
ADQIVLVIEARTSTVPTIENALSLLTTAFGKVDGMILNRRRFEVPANVLARINSWRGAA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaaatccgctctctacgcgacctcttgcggctgtttttcattttccgccgcgaa
ttcaagctggccgtgatcaccacgattgtggtggccgtgctgggtgccttcctgttgccg
gctcgctacgagtccgacgcacgcttgctggtcaagcctgggcgggacaacaccacactg
ccgatcgaagccgccaaccgccagacgctgattgcgccaagcacccagcacgacccgatt
gtggatgaggagaaaatgctcaccggccggcccatcgtgcatatcgttgccgagcgctac
ctggcaatgacctccgagccgccacagggcttctggaaagtcaccaagttctacgtcaag
aaagccgccggggaagtgctggatgtggtgcgcagcgtcctgcaattcgtcggcctggcc
gagaaacaaagcccgctggaacgcctggcgaccaagctggagaagaatttcgaggccggc
cacgaaccgggctcctcggtgatcgagatttccttcacctgggacgacccggtcatcgcg
caaaaggtcgtcgagacctgggtcaatgcctacctcgaagagcgtgcgcggattcttggg
cgcaagagcctgcataccttctatgaagccgagcgcaccaaggtcgccaccaacatccag
gggctcaaggatgaactgcagggccgcttgaagcagatcgattcgatcagcgtggatgcg
cgcctgaaaaacctgaccaaccagatcgatcgcgtcaccgacgccaaggtcagcgcacaa
aaccagatcgccgggatccgcagcttcctggccaacgccagccagcagatcaagagccag
ccagcggaagtggtcaccgcccgggaaaccagcctcaacccgacccagcttgacctcaag
cgccagctcaatgccctgcaagtggagcgcgcgcgcctgctgcgcacctacctgccaggc
acgccgcaggtcaaccagatcgagcagaacatccgcgacatggaagccctcagcgcccag
gaagccacacgcctggaacgctcgcaaaacaccgcgcccaacagcctggtgatcaacgtc
aagcagcagatcatcgacgcccagttgcaagagcgcaaactggccggggaaatcgagaac
tacgacaagaccctcgccgaactgcgcgcccagcgtgaccaggcgatgaccgatgagccc
gagctgaacaagctgacccagcaactgcgcaccgccgagaaaagctacgcgctgtactcg
gaaaacctcgaacaggcgcgcatcgaccacgaactggacagcagccagatcagcaacatc
gccctgatcgagcacgccaccctcaacccggcgcgcgtgtttcccaagagcctgctgatt
ctgctgttcaccattccggccggcctggccgtcggtttgctgaccatctacgtgctgtac
ctgctggaccagcgcatccacgatggtgcgcggttgcaggaagtgtttggcgtaccgctg
tggagcagcatccccgatgtgcagcatgcgacgccggcggccctcaccgccagcatctat
cgcttgtacagcctgctgcccgccgagcgcatcgccagcgacggctttgccctgggcctg
acctcggcacggcatggcgaaggcgtgagctttatcatcgagcagctcaagcgcctgctc
gaagagcgcgggcatcgggtcacggtcaatggcacgcaagcggcgcagccgggtgaagta
ctgctgctggacgcctctgccctgtcgtccaacccgcaggcattcctcaccctgcgccgc
gccgaccagattgtgctggtgatcgaagcccgcaccagcaccgtccccaccatcgagaac
gccctgtcgttgctgaccaccgcgttcggcaaagtcgatgggatgatcctcaaccgccgc
cgttttgaagtgccggccaatgtcctggcgcggatcaacagctggcgcggtgcggcctga
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